KEGG   Arabidopsis thaliana (thale cress): AT1G16190
Entry
AT1G16190         CDS       T00041                                 
Symbol
RAD23A
Name
(RefSeq) Rad23 UV excision repair protein family
  KO
K10839  UV excision repair protein RAD23
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03420  Nucleotide excision repair
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT1G16190 (RAD23A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT1G16190 (RAD23A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ath03051]
    AT1G16190 (RAD23A)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT1G16190 (RAD23A)
Proteasome [BR:ath03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    AT1G16190 (RAD23A)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      AT1G16190 (RAD23A)
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE UBA_3 TECR_N Dsc3_N
Other DBs
NCBI-GeneID: 838188
NCBI-ProteinID: NP_173070
TAIR: AT1G16190
UniProt: Q84L32 A0A178W4Q3
Position
1:5543119..5546103
AA seq 368 aa
MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV
ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSIAVPASNST
PVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERA
VDYLYSGIPETVTIPATNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSDAAGGDLGT
LEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGS
DGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLL
EHSADFED
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgaagctcactgttaagactctcaagggtagccattttgagattagggttcttcccacc
gacacgataatggcggtgaagaagaatattgaagattcacaaagcaaagacaactatcct
tgtgggcagcaattactgattcacaatggaaaggttttgaaagatgaaactaccttggtg
gagaacaaggttaccgaggagggttttcttgtcgtgatgcttagcaagagcaaaactgca
agttcagctggtccctcttctactcagcctacttctaccacgacatctaccatatcttca
accacgcttgcagctccgtcgacaacccagtctattgctgtgccggcttcaaattctact
cccgttcaagaacaaccaacggcacaaagtgacacctatggtcaagctgcttcaacttta
gttagtggcagtagtattgagcaaatggttcaacaaataatggaaatgggaggaggcagt
tgggacaaagaaacggttactcgtgcacttcgtgcagcatataacaaccctgagagagca
gtggattatctatattctggaattcctgaaacagtaaccattccagcaactaatttatct
ggagtaggatctggtagagaacttactgctcctcctccctctggaggccctaattcatct
cctctggatttgtttccccaggaagcagtttctgatgcagcaggtggagatcttggaacg
cttgaattcctcagaggcaatgatcagttccaacaattacgctccatggtcaattccaac
ccccagattctgcagcctatgcttcaagagctcggaaagcagaacccccaacttctgagg
ctaattcaagagaaccaagccgaatttcttcagttactaaacgagccctacgaaggatct
gacggggatgtggatatcttcgatcaacctgatcaagaaatgccccactcagtcaacgtt
acccctgaagagcaagaatcaattgaacggcttgaggcaatggggtttgatagagcaata
gtcatagaagccttcctttcctgtgaccgtaacgaggaattggctgcaaactatctacta
gagcactcagcagattttgaagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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