KEGG   Arabidopsis thaliana (thale cress): AT1G17720
Entry
AT1G17720         CDS       T00041                                 
Symbol
ATB_BETA
Name
(RefSeq) Protein phosphatase 2A, regulatory subunit PR55
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AT1G17720 (ATB_BETA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ath01009]
    AT1G17720 (ATB_BETA)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G17720 (ATB_BETA)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G17720 (ATB_BETA)
Protein phosphatases and associated proteins [BR:ath01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     AT1G17720 (ATB_BETA)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     AT1G17720 (ATB_BETA)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     AT1G17720 (ATB_BETA)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd ComGF
Other DBs
NCBI-GeneID: 838348
NCBI-ProteinID: NP_564033
TAIR: AT1G17720
UniProt: Q39247 Q0WW19
Position
1:complement(6093185..6098443)
AA seq 501 aa
MNGGDDAATSGPPPSLEWRFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRV
VLFERTDTKDHGGSRKDLEQTDYPVRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRW
CQPANGALFLLSTNDKTIKYWKVQEKKIKKISEMNIDPSESSNIPPQLVTNGLPADKGHD
YLSKDFSFPPGGIPSLRLPVVVTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISA
DDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKGSIRLID
MRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYILSRDYMTLKLWDINM
DSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGASQGS
TEAATLEASKNPMRRQIQTPARPSRSIGSMTRVVRRGSESPGTEANGNAYDFTTKLLHMA
WHPTENSIACAAANSLYMYYA
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgaacggtggtgacgatgccgctactagtggtcctcctccgtctttagagtggagattc
tctcaggtcttcggtgagcgaaccgccggagaagaagttcaggaagttgacatcatttca
gccatcgaatttgataaaagtggagaccatctcgcaactggtgaccgtgggggccgagta
gttctttttgaaaggacagatactaaagatcatggagggtccaggaaggatcttgagcag
acggattacccagttaggcatcctgagtttcgatataaaacagaatttcagagtcatgaa
ccagagtttgactatctcaagagtttggagatagaggagaaaatcaacaaaatcagatgg
tgtcagccagctaatggtgcattgtttctgctttctacaaacgataaaaccatcaaatat
tggaaggtacaagagaagaagatcaagaaaattagtgaaatgaatattgatccgtcagaa
agttcaaatatccctcctcaattagttactaatggattacctgctgataaagggcatgac
tacctgagcaaggacttttctttcccgccaggaggcattccatctctgcgtttgcctgtg
gtagttaccagccaggagactaaccttgtggctagatgccgaagagtgtatgcccatgct
catgattaccatattaattcaatctccaatagcagtgacggagaaacctttatttcggct
gatgatctgcgagtaaatctctggaatttggaaattagcaaccagagtttcaatattgtt
gatgttaagcccacaaacatggaggacttaactgaggttattacatcagctgagtttcat
cctatccattgtaatatgctcgcatatagtagttcaaaaggctccattcgtttgattgat
atgcgtcaatcagctctgtgtgattctcatacgaaattatttgaagaaccggaagcacct
ggttcaagatcatttttcacagagataattgcctcaatttcagatattaaattctcaaag
gatgggagatacatacttagtcgcgattacatgacgctcaagctgtgggacataaacatg
gattctggtccggtcgcatcttaccaggttcatgaacatctgagacccaggctatgcgat
ctatatgaaaatgactccatctttgataaatttgagtgttgtctgagtggcgatggattg
agggtagcaacaggttcttacagcaatctattccgcgtatttggagcgtctcaaggaagt
actgaagctgcgactttggaagctagcaaaaacccgatgaggaggcaaatccagacacct
gcaagaccatccagatctataggcagtatgacacgcgtggttagacgaggatcagagagt
cccggaacagaggcaaatgggaacgcctacgatttcacaacaaagttgctgcatatggct
tggcacccaacagagaactcaattgcttgtgcagcagcaaacagcttgtacatgtactat
gcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (4)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (38)   

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