KEGG   Arabidopsis thaliana (thale cress): AT1G17745
Entry
AT1G17745         CDS       T00041                                 
Symbol
PGDH
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
  KO
K00058  D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00260  Glycine, serine and threonine metabolism
ath00270  Cysteine and methionine metabolism
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
ath01200  Carbon metabolism
ath01230  Biosynthesis of amino acids
Module
ath_M00020  Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AT1G17745 (PGDH)
   00270 Cysteine and methionine metabolism
    AT1G17745 (PGDH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT1G17745 (PGDH)
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     AT1G17745 (PGDH)
    1.1.1.399  2-oxoglutarate reductase
     AT1G17745 (PGDH)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT1G17745 (PGDH)
SSDB
Motif
Pfam: 2-Hacid_dh_C 2-Hacid_dh PGDH_inter ACT KARI_N AdoHcyase_NAD NAD_binding_2 TrkA_N F420_oxidored ACT_AHAS_ss
Other DBs
NCBI-GeneID: 838352
NCBI-ProteinID: NP_564034
TAIR: AT1G17745
UniProt: O04130 A0A178W962
Position
1:6100964..6105347
AA seq 624 aa
MAFSSSCSSVKAVNSRWTSPSPSPSSRFAVLPAFLHRRYATSVKLTAISAALKTVEQTTL
TEDNRFSTVGSDSDEYNPTLPKPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKV
AESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTV
AAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRA
KGLGMTVISHDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFNDETFSK
MKKGVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENVTVTPH
LGASTKEAQEGVAIEIAEAVAGALKGELSATAVNAPMVAPEVLSELTPYIVLAEKLGRLA
VQLASGGKGVQSIRVVYRSARDRDDLDTRLLRAMITKGIIEPISDSYVNLVNADFIAKQK
GLRISEERMVVDSSPEYPVDSIQVQILNVESNFAGAVSDAGDISIEGKVKYGVPHLTCVG
SFGVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVNFMSVGRTVLRKQAIMAIGVDE
EPDNKTLERIGGVSAIEEFVFLKL
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggcattttcatcttcgtgttcgtccgtcaaagccgtcaactcacggtggacgtctccg
tctccgtcaccgtcttctagattcgccgtcctccctgctttccttcaccgccgttacgca
acaagcgtcaaactaacggccataagcgccgccttaaaaaccgtcgagcaaacgacgtta
acagaggataacagattctcaaccgtcggatctgactctgatgaatacaatccaactctt
ccaaagccgaggatcctcgtcaccgagaaactgggagaagccggcgtgaatctcctcagg
gaattcggcgacgttgactgctcttacgatctttcgccggaagatctgaagaagaaagtg
gcggagagtgacgctctgatcgtgagaagcggaactaaagtgacgagggaagtgtttgag
gcggcgaaggggaggttgaaagtggtcggaagagccggagttgggattgacaatgttgat
ctgcaggcggcgacggagcacgggtgtttggtggttaatgctccaacggctaatacggtg
gctgctgccgaacatggaattgctttgcttgcttctatggcacgtaacgttgctcaggcc
gacgcttctattaaagccggaaaatgggagaggagcaagtacgtcggtgtatctctcgtc
ggaaaaaccttggccgtgatgggtttcgggaaagttgggacggaggtggcgagaagagcc
aaaggtctaggcatgaccgttatctcccacgacccttacgcgccagctgacagagccaga
gctctcggtgtcgatcttgtttcattcgatcaagctatctccaccgccgatttcgtctcc
ctgcacatgcctttaactccggccaccaaaaaggtcttcaacgacgaaactttctctaag
atgaagaaaggtgtgcgtctcattaatgtcgctagaggtggcgtcatcgacgaggatgca
ctcgttagagctctcgatgccggaatcgttgctcaggcagcattagatgtgttctgtgag
gaaccaccatcgaaagatagcagactaattcagcatgaaaatgttactgtgacacctcat
cttggagctagcacaaaagaagctcaggaaggtgtagccattgagatagcagaggctgta
gcaggggcattgaaaggagagttatcagctactgccgtcaatgctccaatggtggctcct
gaggtcttgtctgagttgactccttatattgtcttagctgagaagcttgggaggttagct
gtgcagttagcatctggaggtaaaggagtacagtccattagggtggtctatcggtcagct
cgtgaccgagatgatttggatactagactacttcgtgcaatgatcacaaagggaatcatt
gaaccgatctcagattcatatgtcaacttggtgaatgctgatttcatagctaaacaaaag
ggtcttcgtattagtgaggaacgaatggttgttgattcatcaccagagtaccctgttgat
tccatccaagttcagattttgaatgtggagtcaaatttcgctggtgctgtctctgatgct
ggtgatataagtattgaagggaaggtgaagtacggagttccgcatttaacttgtgtcgga
tcatttggtgtggatgtgagccttgaagggaatctgatactgtgcaggcaagtggatcaa
ccagggatgattggacaggttggtaacatacttggagaacaaaacgtgaatgtgaatttc
atgagtgttggaagaacagtgttgaggaaacaagcgataatggcgattggagttgatgaa
gaaccagacaacaaaacacttgagaggattgggggtgtttctgcgattgaagagtttgtg
tttcttaaactataa

  All links  
Gene (10)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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