KEGG   Arabidopsis thaliana (thale cress): AT1G48790
Entry
AT1G48790         CDS       T00041                                 
Symbol
AMSH1
Name
(RefSeq) associated molecule with the SH3 domain of STAM 1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT1G48790 (AMSH1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ath01002]
    AT1G48790 (AMSH1)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G48790 (AMSH1)
   04121 Ubiquitin system [BR:ath04121]
    AT1G48790 (AMSH1)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     AT1G48790 (AMSH1)
Peptidases and inhibitors [BR:ath01002]
 Metallo peptidases
  Family M67
   AT1G48790 (AMSH1)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Others
   Others
    AT1G48790 (AMSH1)
Ubiquitin system [BR:ath04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    AT1G48790 (AMSH1)
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 841301
NCBI-ProteinID: NP_564533
TAIR: AT1G48790
UniProt: Q8VYB5 A0A178W2J9
Position
1:complement(18043672..18047806)
AA seq 507 aa
MGSSFETIDIATSARRIGVDNRISLKFYFRIADNILKQANIFRAEKNVIDLYVMLLRFSS
LALETIPSHRDYRTSLKSNKEYLRMRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQA
HPANGSLGWSSAVKPSFNSYDHAKVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVNF
RPNEETLSKHSILGPGGLSAQWQPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMITNG
SNDEPEKPIVEPSVASNEKIQKNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAEVQD
LVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFMRLAKSNTKKNLETCGI
LAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQSCFM
SSIDVHTHYSYQIMLPEAVAIVMAPQDSSRNHGIFRLTTPGGMTVIRNCDRRGFHAHSSP
EDGGPIYNTCKEVYMNPNLKFDVIDLR
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggggtcgtcttttgagaccatcgatatcgctaccagtgctcggagaattggcgtagat
aatcgtatttctctcaaattttacttcaggatcgctgataatatcctcaaacaggccaac
atatttcgggcagagaagaatgttattgatttatatgtcatgcttctgcggttttcaagc
ttggctctcgagactataccgtcccatcgagattacagaacatctctaaaaagcaataaa
gagtatttgagaatgagactactagatgtcttgacggagctggagaagttgaaaccagtt
gtacagcaaaggattgatgaactgtatcccaagctcaaacctcgatataacgttcaagct
catccagcaaatggttccctaggctggtcttctgccgtgaaaccgtcatttaatagctat
gatcatgcaaaggtaagaaatcctcctggacataattctggctacatgggttccaggggt
cagcaatttttgaacgctgcaccacttgaagagcgtttccgaaagatgtcggtgaacttc
cgaccaaatgaagaaaccctttccaagcattctatcttgggtccaggtggactctctgca
cagtggcagccaccaaagtatgatacaaaggttcaatatccaagcaatatagatttttcg
cctgttgtaatcccaagcttccaacaacttgtggacagcaaaccaatgataacgaatggc
agtaacgatgaacctgaaaagccaattgtggaacccagtgttgcatctaatgaaaaaatc
cagaaaaattacactgaagagctttcttccatgatttctttcgaagagccagaaagcgtt
aatgagaacaatctcattaggcaaccttcaccacctccagtgctagcagaagttcaagac
ttggttcctgctttatgtcctgaagttagagaaccggaatgtatgatagaaaactctctg
ccggatgagtctctacggtcggagtctcctcttgaacttcatattgcgacttcaatgatg
gatacctttatgaggcttgccaagtcaaacactaaaaagaatttagagacgtgtggtatt
cttgccggttcactaaaaaacagaaaattttacattacagctctcatcataccaaagcag
gaatcgacatctgactcgtgtcaggccacgaacgaagaagagatatttgaagtacaggac
aagcaatcccttttcccactcggatggattcatacgcatccgacacagtcttgtttcatg
tcatccattgatgttcacacacactattcataccagattatgttaccagaagctgtggca
atcgttatggcgccacaagactcttcaaggaatcacggaatatttcggctgacgacgccg
ggaggaatgacggtgataaggaattgtgaccggcgtgggtttcatgcgcacagttcaccg
gaggacggagggccaatttacaatacctgtaaggaagtttacatgaacccaaatctcaag
tttgatgtcattgatctcagatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (3)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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