KEGG   Arabidopsis thaliana (thale cress): AT1G49220
Entry
AT1G49220         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT1G49220
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT1G49220
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    AT1G49220
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_UBOX FANCL_C zf-RING-like DUF116 zf-RING_16
Other DBs
NCBI-GeneID: 841345
NCBI-ProteinID: NP_175348
TAIR: AT1G49220
UniProt: P0C034 A0A178W5U7
Position
1:18205934..18206701
AA seq 251 aa
MSANELPSSAQAFQEQFLGGFVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSGNVMM
LLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVV
SYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL
VETCQKILGDFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVIVMIAPLEP
EGRVNTIREIS
NT seq 756 nt   +upstreamnt  +downstreamnt
atgtctgcaaatgagttaccttcttcagctcaagccttccaagaacaattccttggcggt
tttgtctctagaaagctgcttctgcacaacccatttgaccacaacactcaacgagccttt
gcggttgcaccatctcctctcataacccatgagaacaacctcagtgggaatgttatgatg
cttctctcaatcctcatttgtggcattatctgctgcctcgggttacattacatcattcgt
tgtgcactcagacgttctacacgtttcatgatctccgagcctgtaccaagtctttcgtca
acacggggttcatcaaacaaaggaatcaagaagaaagctcttagaatgttcccagttgtg
agttactcacctgagatgaacctgccagggcttgacgaagagtgtgtcatttgtttgtct
gattttgtttccggtgaacagctcaggctgctccccaagtgtaaccacgggttccatgtt
cgttgcatagacaagtggcttcaacaacatctgacttgtccaaaatgcagaaactgtctg
gttgagacgtgccaaaagatattaggtgacttcagtcaagctgattcagttacggcagaa
ccaacagagatcgtaattgtcacgattgttcctctagaaccaacagagatcgtaattgtc
acgattgctcctctagaaccaacagagatcgttattgtcatgattgctccgctagaacct
gaaggaagagtaaacactattagagaaatcagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (42)   

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