KEGG T00041: AT1G50000

Arabidopsis thaliana (thale cress): AT1G50000

Entry

AT1G50000         CDS       T00041

Name

(RefSeq) methyltransferase

K09761

16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]

Organism

ath Arabidopsis thaliana (thale cress)

Brite

KEGG Orthology (KO) [BR:ath00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT1G50000
Enzymes [BR:ath01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     AT1G50000
Ribosome biogenesis [BR:ath03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    AT1G50000

SSDB

Motif

Pfam:

Methyltrans_RNA PUA_4 SH3_13

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

TAIR:

UniProt:

Position

1:complement(18515059..18517290)

AA seq 210 aa
MMRALAAASRPLFSDLPSLVRSWLPTSSFKSFATVSSSPPSDLNLRNQSRGGLPRFFSDD
LPSRKGGVVRVQGSEFWHMAKVLRLKQEDRVELFNGKGGLVEGCIQSIDKTGVDFIAQED
QKVILPQGMQWQVFAAFGTLKGGRADWLIEKCTELGASSVTPLLTERSPIISENRVDRLE
RVSFAAAKQCQRLHQMVLNPPIKFGTLLDH

NT seq 633 nt +upstreamnt +downstreamnt
atgatgagagcgctagcggcggcttcacggccactgttttccgatttgccgagtctcgtt
cgttcatggcttccgacttctagcttcaaatcgtttgctactgtatcttcgtctcctccg
tcggatttgaatctccggaatcaatctcgcggtggccttcctcgattcttttccgatgat
cttccatctcgcaagggtggagttgttcgtgttcaaggctctgagttttggcatatggct
aaagttcttagactgaaacaggaggacagggtagaactctttaatggcaaagggggtcta
gtagaaggctgtatacaaagcatagacaaaactggagttgattttatcgcacaagaagat
cagaaggtgattcttcctcagggcatgcagtggcaggtgtttgcagcttttggaactttg
aagggtggtcgagcggattggctaattgagaaatgtacagaactcggagcgagcagtgtc
acaccacttttaacggaaagatcacccataatctctgaaaaccgggtcgatagattggaa
cgcgttagttttgctgcagctaagcaatgccaaagacttcatcaaatggtactgaaccct
ccaatcaaatttggtaccctcttggatcattaa

All links

Gene (11)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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