KEGG   Arabidopsis thaliana (thale cress): AT1G54360
Entry
AT1G54360         CDS       T00041                                 
Symbol
TAF6B
Name
(RefSeq) TBP-ASSOCIATED FACTOR 6B
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AT1G54360 (TAF6B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT1G54360 (TAF6B)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G54360 (TAF6B)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     AT1G54360 (TAF6B)
   Coactivators
    SAGA/TFTC/STAGA complex
     AT1G54360 (TAF6B)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     AT1G54360 (TAF6B)
    STAGA complex
     AT1G54360 (TAF6B)
    TFTC complex
     AT1G54360 (TAF6B)
    SAGA complex
     AT1G54360 (TAF6B)
    SLIK complex
     AT1G54360 (TAF6B)
SSDB
Motif
Pfam: TAF6_C TAF Histone
Other DBs
NCBI-GeneID: 841877
NCBI-ProteinID: NP_974024
TAIR: AT1G54360
UniProt: F4HVA6
Position
1:20290556..20293324
AA seq 527 aa
MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQVYHQLQLYFCPLISSLTCRR
NLQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSGSKSMRFKRAPENRDLYFFDDKDVE
LKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAISDLKRSEYKDDGLAARQVL
SKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYP
ILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVA
STCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGP
YLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTN
GKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQMQMRGTTTVPQQSHTDADARH
HNSPSTIAPKTSAAAGTDVDNYLFPLFEYFGESMLMFTPTHELSFFL
NT seq 1582 nt   +upstreamnt  +downstreamnt
atggtgacgaaagaatccattgaagtgatagctcagagcattggactctccactctttct
ccggacgtctcagccgctcttgctcccgatgtcgagtatcgcgtccgagaggtcatgcag
gtatatcatcaacttcaactttacttttgccctctaatctcctctttaacttgtcgtcgc
aatctccaggaagctatcaaatgcatgcgtcatgctcgacgcaccactttaatggctcat
gatgtcgattctgctcttcatttcaggaatttggagcctacctctggctccaaaagtatg
cggttcaagagagctcctgagaacagagatctatacttcttcgatgacaaagatgtcgag
ctcaagaatgttatcgaagctcctctaccaaatgcacctcctgatgcatctgttttctca
ttggttggcaattgatggtattcaaccttccattccacagaattctcctctccaagccat
atctgaccttaaacgatcggaatataaggacgatggcttggctgctagacaggtgctttc
taaggaccttcagatttactttgacaaagtcacggagtgggctttgactcaatctggctc
caccctctttagacaagcactcgccagcttggaaattgatcctggactccacccattagt
tccctttttcacttctttcatcgctgaagagattgtcaaaaacatggataattatccaat
cttgttggctttgatgcgtcttgctagaagcctccttcataaccctcatgtacatattga
gccatatctgcatcagttgatgccgtctattatcacttgccttattgccaagcgcttagg
aagaaggtcatctgataatcactgggacttgagaaacttcactgccagcacagttgcttc
aacgtgcaaaaggtttggacacgtttatcacaatttgttgccacgtgtcacaagatcact
gcttcatacctttttggacccaaccaaggcactcccacaacactatggggcaattcaagg
gatggtagcccttgggcttaatatggttcgctttcttgttctcccaaacctagggccgta
tttgctgcttcttttacctgaaatgggacttgagaagcagaaggaagaagctaagaggca
tggggcttggcttgtttatggagcgttgatggtggcagctggtcgatgcctatatgaacg
gcttaaaacatctgagacactgctgtctcctccaactagctctgtctggaagacaaatgg
aaagctcaccagccccaggcaaagtaaacgcaaagcaagcagtgacaacttaactcatca
accaccactgaagaagatagcagtagggggaattatacaaatgagctccacacaaatgca
gatgcgcggaaccacaacagtccctcaacagtcccacacagatgcagatgcacggcacca
caatagtccctcaacaattgctccgaagacttcagctgctgcaggcactgacgtcgacaa
ctatctctttcctctttttgagtattttggtgagagcatgcttatgttcacccccacaca
tgagctcagtttcttcttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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