KEGG   Arabidopsis thaliana (thale cress): AT1G70980
Entry
AT1G70980         CDS       T00041                                 
Symbol
SYNC3
Name
(RefSeq) Class II aminoacyl-tRNA and biotin synthetases superfamily protein
  KO
K01893  asparaginyl-tRNA synthetase [EC:6.1.1.22]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AT1G70980 (SYNC3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ath01007]
    AT1G70980 (SYNC3)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT1G70980 (SYNC3)
Enzymes [BR:ath01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.22  asparagine---tRNA ligase
     AT1G70980 (SYNC3)
Amino acid related enzymes [BR:ath01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AT1G70980 (SYNC3)
Transfer RNA biogenesis [BR:ath03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    AT1G70980 (SYNC3)
 Prokaryotic type
    AT1G70980 (SYNC3)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon WHEP-TRS tRNA-synt_2d
Other DBs
NCBI-GeneID: 843436
NCBI-ProteinID: NP_177254
TAIR: AT1G70980
UniProt: Q9SSK1 A0A178WMG1
Position
1:26762041..26764623
AA seq 571 aa
MGDEIVPPANQLAADNLENDGSTVQKAQFSDRVLIRSILGGGAKLAGQKVRIGGWVKTGR
QQGKGTFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTCVTVDGVLKIPPEGKGLKQS
IELSVETVIAVGTVDPTTYPLPKTKLTPEFLRDVLHLRSRTNLISAVARIRNALAFATHS
FFQEHSFLYIHTPIITTSDCEGAGEMFQVTTLINHTERVEQDLIDNPPPTEADVEAARLI
VKERGEAVAQLKVAKASKEEITASVAQLSVAKASLAHVEERLRLKPGLPKNDGKIDYSND
FFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIH
DDMNCAEAYVKYMCKWLMDKCGDDMELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERL
EKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEK
TVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLPMEPYEWYLDLRRYGTVKHCGFG
LGFERMIQFATGIDNIRDVIPFPRYPGKADL
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgggtgatgagattgtgcctccggcgaatcagttagccgccgataacttggaaaacgat
ggatctacggtgcagaaagcgcaattttcagacagggttctgattcgatcgattttgggc
ggcggagctaaactcgccggtcaaaaggttagaatcggtggttgggttaaaaccggaaga
cagcaagggaaagggacttttgctttccttgaggttaacgatgggtcttgtccagcgaat
ctccaggttatggttgattcatctctttatgatctctctaggttggttgcgactggaact
tgtgttactgttgatggagttttgaagattcctccggaaggtaaaggtttgaagcagagt
attgagcttagcgttgagacggtgattgcggtgggaactgttgatccgactacgtatccg
cttcctaagactaagttgactcctgagtttctcagagatgtgcttcatcttcgttctagg
actaacttgatctcagcagttgcaagaatccgtaacgcgcttgcttttgcgacgcatagt
ttttttcaagaacatagtttcctttacattcacactcctatcatcacaacaagtgattgt
gaaggtgctggtgaaatgttccaagtgacaaccttgatcaatcacactgagagggttgag
caggatctcattgataaccctccaccaactgaggctgacgttgaagcggccaggcttatt
gtcaaggagagaggtgaagctgttgcgcaacttaaagttgccaaggcgagcaaggaagag
atcactgcttccgttgctcaactaagtgtagcaaaggcgagtttagctcatgttgaagag
aggttaaggcttaagcctggactacctaagaatgatggtaaaattgattattccaatgat
ttctttggccgtcaagctttcttgacagtttctggtcagttacaagtggagacctatgct
tgcgctcttagcagcgtgtatacatttggtcccacttttcgggcagagaactctcacact
tcaaggcatttagctgagttctggatggttgagcctgaaattgcttttgcagatatacat
gacgacatgaactgtgcagaggcgtatgtgaaatacatgtgcaaatggttgatggataaa
tgtggcgatgacatggaacttatggataagaacgtcgacgagggatgcactaaaaggcta
aacatggttgccaaagcctcgtttaagcgtgtaacatacactgaagcaatagagcgactt
gagaaagctgtagctcaaggaaaggttgtttttgataacaaagtggagtggggaatcgac
ttggcctcagagcatgaaagatacttgacagaggttgagtttgatcaaaagccaataatt
gtgtataactacccgaaaggaatcaaagctttttacatgagacttaacgatgatgagaag
acagttgctgccatggatgtccttgttccaaaggttggagaactcattggtggaagccaa
agggaagaacgatatgatgttatcaaacagaggatcgaggagatgggtctaccaatggag
ccatatgagtggtacctagacttgcgtcgttatggaacagtgaagcattgtggatttgga
cttggcttcgaacgtatgattcagttcgctacaggaattgataacatcagagatgttatt
cctttccctcgctatcctggaaaagctgatctctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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