KEGG   Arabidopsis thaliana (thale cress): AT1G71280
Entry
AT1G71280         CDS       T00041                                 
Name
(RefSeq) DEA(D/H)-box RNA helicase family protein
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT1G71280
Enzymes [BR:ath01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AT1G71280
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    AT1G71280
SSDB
Motif
Pfam: DEAD DUF4217 Helicase_C ResIII CMS1 AAA_22
Other DBs
NCBI-GeneID: 843469
NCBI-ProteinID: NP_177284
TAIR: AT1G71280
UniProt: Q9FVV4
Position
1:complement(26870093..26872152)
AA seq 465 aa
MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVD
AATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAK
CREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQ
VNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKK
LVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTD
VAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAM
GYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEK
RGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggattcatcgccaccgaacactatcatcgaggaggcgccgccgcgtttctctgaactc
aaacctccgctctcagaagatatcatcgaggcgcttgaccggtccggtttcgaggtctgc
actccggttcaggccgagacgatccctttcctctgcagccacaaggatgttgtcgtcgac
gcagccactggttctggaaaaaccctagctttcctccttcccttcatagagattatccgt
cgatccaactcctaccctccgaagccacaccaggtaatgggggtgattatatcgccaacg
agagagctatcagcgcagatacataaggtggcaagagccgttcgtctcgactttgccaaa
tgtcgagaggtggaagctgacatgaatactctcgaagaagaaggagccaatctcttgatc
ggcacccctggaaggctttcagatatgatgaaacgaatggagtttctggattttcgaaat
ctcgagattcttatcttagatgaggccgatagacttttggatatggggttccagaagcag
gtcaattacattatatctcgcttgccaaagcaacgtaggactggcctcttttcagctaca
caaacacaagctgttgcagacctggccaaggctggccttaggaatccttatttgaaatgc
gaagcagatcaaaagtcatctcaactagtgcatctcctgatcgagaacaaaaataaaaag
cttgtcgtattcttcatgacatgtgcttgtgttgattactggggactcgtaatttcaaaa
attcctagcctcaagtccatttccttctttcccacccatgggaagatggatcagaaaggt
agagacacggcattagcttcgtttacagaggcatcaagcggtgtccttctatgcacagat
gtcgctgcacgtggacttgacattccaggcatcgtttacatacgttcactagccatcaag
gaccgggaagtgttggagaagggattaaaggcatttgtttcctttgtccgtgcttataag
gagcatcaatgctcttacattttcagttggaaaggacttgaaatcggaaagttagccatg
ggatatggcatcttgtcttttccttacatatctgaagttaaacaagacagaattggcatt
gtcggttttacacctgtccaaggcatcacgtttgaggacataaaattcaagaacaaatct
cgggagaaacaaaggcagcaaaacttattagcaaggaaagacaaactgcaacaagaaaag
agagggaaacgcaagaaaagctccaaagaggcggttgatgattctaacaaagcgtcgaga
aagagaaagttaacggggaggcaaagacaaactatccaaacagctcaagatgaagaagaa
atgaatttgagattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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