KEGG   Arabidopsis thaliana (thale cress): AT2G20000
Entry
AT2G20000         CDS       T00041                                 
Symbol
HBT
Name
(RefSeq) CDC27 family protein
  KO
K03350  anaphase-promoting complex subunit 3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT2G20000 (HBT)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ath01009]
    AT2G20000 (HBT)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT2G20000 (HBT)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT2G20000 (HBT)
Protein phosphatases and associated proteins [BR:ath01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     AT2G20000 (HBT)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Other subunits
     AT2G20000 (HBT)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    AT2G20000 (HBT)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_8 ANAPC3 TPR_12 TPR_19 TPR_17 TPR_11 TPR_16 TPR-S TPR_10 ANAPC8 TPR_9 DUF7017
Other DBs
NCBI-GeneID: 816519
NCBI-ProteinID: NP_849994
TAIR: AT2G20000
UniProt: Q8LGU6 A0A5S9WZG2
Position
2:complement(8631959..8637300)
AA seq 744 aa
MEAMLVDCVNNSLRHFVYKNAIFMCERLCAEFPSEVNLQLLATSYLQNNQAYSAYHLLKG
TQMAQSRYLFALSCFQMDLLNEAESALCPVNEPGAEIPNGAAGHYLLGLIYKYTDRRKNA
AQQFKQSLTIDPLLWAAYEELCILGAAEEATAVFGETAALSIQKQYMQQLSTSLGLNTYN
EERNSTSTKNTSSEDYSPRQSKHTQSHGLKDISGNFHSHGVNGGVSNMSFYNTPSPVAAQ
LSGIAPPPLFRNFQPAVANPNSLITDSSPKSTVNSTLQAPRRKFVDEGKLRKISGRLFSD
SGPRRSSRLSADSGANINSSVATVSGNVNNASKYLGGSKLSSLALRSVTLRKGHSWANEN
MDEGVRGEPFDDSRPNTASTTGSMASNDQEDETMSIGGIAMSSQTITIGVSEILNLLRTL
GEGCRLSYMYRCQEALDTYMKLPHKHYNTGWVLSQVGKAYFELIDYLEAEKAFRLARLAS
PYCLEGMDIYSTVLYHLKEDMKLSYLAQELISTDRLAPQSWCAMGNCYSLQKDHETALKN
FLRAVQLNPRFAYAHTLCGHEYTTLEDFENGMKSYQNALRVDTRHYNAWYGLGMIYLRQE
KLEFSEHHFRMAFLINPSSSVIMSYLGTSLHALKRSEEALEIMEQAIVADRKNPLPMYQK
ANILVCLERLDEALEVLEELKEYAPSESSVYALMGRIYKRRNMHDKAMLHFGLALDMKPP
ATDVAAIKAAMEKLHVPDEIDESP
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggaagctatgcttgtggactgtgtaaacaacagtcttcgtcattttgtctacaaaaat
gctattttcatgtgcgagcgtctctgcgctgagtttccttctgaggttaatttgcagcta
ttagccaccagctacctgcagaataatcaagcttacagtgcatatcatctgctaaaggga
acacaaatggctcagtcccgatacttgttcgcattatcatgcttccagatggaccttctc
aatgaagctgaatctgcactctgccctgttaatgaacctggtgcggagatcccaaatggt
gcagcaggccattaccttcttggacttatttacaagtatactgatagaaggaagaatgct
gctcaacaatttaaacagtccttgacaatagaccctctactttgggctgcatatgaggaa
ttatgtatattaggtgctgctgaggaagcaactgcagtttttggtgaaacagctgctctc
tccattcaaaagcagtatatgcaacaactgtcaacttccctcggcttaaacacttacaac
gaggaacgtaattcaacttctactaaaaacacgagttctgaagattatagtccaaggcag
tctaaacacacacaaagccatggccttaaagatatctccggaaatttccattctcatgga
gttaatggaggtgtttcgaacatgtcattctataatacgccttcgccagtggctgcacag
ctatccggtatagctccaccaccacttttccggaattttcagccagctgttgcaaaccca
aactcccttattactgacagttctccaaagtccactgttaactctactcttcaagcacct
agaagaaagtttgtagatgaaggaaagttacgtaagatttctggcagactattttctgat
tctggtccacgacggagttcaagactgtctgctgattcaggggcaaacattaattcaagt
gttgcaacagtaagcggaaatgtgaacaacgcttccaagtatttgggaggttctaaattg
agttctttggcacttcgttctgtaacacttcggaagggacactcctgggcaaatgaaaac
atggatgaaggggtccgtggggaaccttttgatgattcaaggcctaatactgcctcaacg
actggttctatggcttccaatgatcaagaagacgaaacaatgtcgattggtggcatagca
atgagttctcaaacaatcacaattggtgtttcggaaattttaaacctccttaggacactc
ggagaagggtgtagactttcatacatgtacaggtgtcaggaggcactggatacgtatatg
aaacttccacataagcattataatacaggatgggttctttcccaggtcgggaaagcatac
tttgaactaattgactatttagaggctgaaaaggcattccgtcttgcccgtctggcttct
ccttattgcttagaaggaatggatatatactctacggtcctctatcatttgaaggaagac
atgaagctgagttacttggctcaggaactaatatcaaccgatcgcttagctcctcaatct
tggtgtgctatgggaaattgctatagcttgcaaaaggaccatgagaccgcactgaagaat
ttcctacgagctgttcaactgaatccaagatttgcatatgcacataccttatgtggccac
gaatacacaactcttgaggattttgagaacggaatgaaaagttaccaaaacgcacttcgt
gtagatacaagacactacaacgcatggtacgggcttggaatgatatatctacgccaagag
aagttagagttctcagagcatcacttcagaatggctttcctaataaacccgagttcctct
gttataatgtcttatttagggacatctttgcatgccttgaagagaagtgaggaagcacta
gagataatggagcaagccatagtagcagatagaaaaaaccctcttccaatgtaccagaaa
gctaacatacttgtctgcttagaaagattagatgaagctctagaagttcttgaggagctc
aaagagtatgcgccttcagagagcagcgtttacgctttaatgggcaggatctataagcgg
cgaaacatgcacgataaagccatgcttcatttcggtctagctttagatatgaaaccgcct
gcaactgacgttgctgcaataaaggctgcaatggagaaattgcatgttccagatgagatc
gatgagagcccgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (45)   

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