KEGG   Arabidopsis thaliana (thale cress): AT2G22310
Entry
AT2G22310         CDS       T00041                                 
Symbol
UBP4
Name
(RefSeq) ubiquitin-specific protease 4
  KO
K11842  ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ath01002]
    AT2G22310 (UBP4)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT2G22310 (UBP4)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     AT2G22310 (UBP4)
Peptidases and inhibitors [BR:ath01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   AT2G22310 (UBP4)
Ubiquitin system [BR:ath04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    AT2G22310 (UBP4)
SSDB
Motif
Pfam: UCH UCH_1 DUF4276
Other DBs
NCBI-GeneID: 816763
NCBI-ProteinID: NP_565532
TAIR: AT2G22310
UniProt: Q8LAM0 A0A178W1M0
Position
2:complement(9476578..9478959)
AA seq 365 aa
MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA
DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLN
ELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETR
CLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKR
MKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLFAVVV
HVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYE
SLGTR
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgggcgcggcggggtccaaactcgagaaagctctcggcgaccagttcccggaaggagaa
cgatacttcggtttcgaaaatttcggcaacacttgttactgtaacagtgttttgcaggct
ctttatttttgtgctccctttcgtgaacaattgcttgaacattatgcaaataataaagct
gatgctgaggagaatctcttgacctgcttggctgacttattttcgcagataagttcccag
aagaagaaaacaggagttatcgctccgaagcgctttgtgcaaaggttgaagaaacagaat
gagcttttccggagttatatgcatcaggatgcacatgagttcctgaattatttgctaaat
gaacttgttgagatcttagagaaagagacacaagccacaaaagcagacaatgaaacttca
tcatctcctgaaaagattgcaaatgtactgaaagctcccctggcaaatggtgttcataaa
gagccaattgttacttgggtgcacaagatttttcagggtatacttaccaacgagacaagg
tgtctacggtgtgagacagtaacagcaagagatgaaactttcctagacctgagccttgat
attgaacagaacagttcgataactagctgtttgaaaaacttcagctccacagagactcta
catgcagaagacaagtttttctgtgacaaatgctgcagtttacaagaagcgcagaagaga
atgaagattaagaaaccgccacacatcttagttatacatctgaaacggttcaaatacatg
gaacagttgggccgctacaagaagctatcgtacagagtcgtcttccctctggaactgaaa
ctcagcaacacagtggatgaatatgtggacattgagtactctctctttgcagtcgtggtt
catgtcggaagtggacctaaccacggtcattatgttagcctcgtgaaatcccataaccac
tggctcttctttgatgatgagagtgtcgaaataattgaagaatctgctgttcaaacattc
ttcggttcatcgcaagagtactcaagtaatactgatcatggctacatcttgttatacgag
agcctcggaacaagatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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