KEGG   Arabidopsis thaliana (thale cress): AT2G22780
Entry
AT2G22780         CDS       T00041                                 
Symbol
PMDH1
Name
(RefSeq) peroxisomal NAD-malate dehydrogenase 1
  KO
K00026  malate dehydrogenase [EC:1.1.1.37]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00020  Citrate cycle (TCA cycle)
ath00270  Cysteine and methionine metabolism
ath00620  Pyruvate metabolism
ath00630  Glyoxylate and dicarboxylate metabolism
ath00710  Carbon fixation by Calvin cycle
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
ath01200  Carbon metabolism
Module
ath_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ath_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ath_M00012  Glyoxylate cycle
ath_M00168  CAM (Crassulacean acid metabolism), dark
ath_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    AT2G22780 (PMDH1)
   00620 Pyruvate metabolism
    AT2G22780 (PMDH1)
   00630 Glyoxylate and dicarboxylate metabolism
    AT2G22780 (PMDH1)
  09102 Energy metabolism
   00710 Carbon fixation by Calvin cycle
    AT2G22780 (PMDH1)
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    AT2G22780 (PMDH1)
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.37  malate dehydrogenase
     AT2G22780 (PMDH1)
SSDB
Motif
Pfam: Ldh_1_N Ldh_1_C 3Beta_HSD Semialdhyde_dh Epimerase DapB_N
Other DBs
NCBI-GeneID: 816808
NCBI-ProteinID: NP_179863
TAIR: AT2G22780
UniProt: O82399 A0A384LAR8 Q0WUS4
Position
2:complement(9689295..9692154)
AA seq 354 aa
MDPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAM
LMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGV
PRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFD
PKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKE
IEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHV
TELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggatccaaaccaacgtatcgcgagaatctctgctcatctcaatcctcctaatcttcat
aatcagattgctgacgggtcaggtttgaatcgggtggcttgtcgggcaaaaggtggatca
cccggattcaaagtggcgatacttggagcagctggtggaattggacaacctcttgcgatg
ttgatgaagatgaatcctttggtttcggttcttcatctctatgatgttgctaatgctcct
ggtgttactgctgatattagtcatatggatactagtgccgttgttcgtggatttctcggg
cagccgcagttagaggaagcacttacgggtatggatttagtgatcatacctgctggtgtt
ccgaggaaaccagggatgacgagggatgatctgtttaacattaatgctgggattgtgagg
acactctctgaagctatagctaaatgttgtcctaaagcaattgtgaatataatcagtaat
ccggtgaactccacggtgccaatcgcagctgaggttttcaagaaagctggaacctttgat
ccaaagaaactcatgggtgtcactatgcttgatgttgttagagctaatacctttgtggcg
gaagtaatgagtcttgatccccgtgaagttgaagttccggttgttggaggacacgcagga
gttacgattttaccactgctttcgcaggtgaaacctccttgctcgttcactcaaaaagag
attgaatatctcacagaccgcatccaaaacggtggcactgaagttgttgaggctaaagct
ggagcaggttctgcaacactatccatggcatatgcagcagtggagtttgcagatgcttgc
ctcaggggtctacgaggtgatgcaaacatcgttgagtgcgcatatgtggcatcccatgtg
actgagcttcccttcttcgcatcgaaggtgcgtctgggacgatgtgggatcgatgaagtg
tacggccttggaccattgaacgaatatgagaggatgggattagagaaggcaaagaaagag
ctttcagtaagtattcataaaggtgttacctttgcgaagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (8)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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