KEGG   Arabidopsis thaliana (thale cress): AT2G25140
Entry
AT2G25140         CDS       T00041                                 
Symbol
CLPB4
Name
(RefSeq) casein lytic proteinase B4
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ath03110]
    AT2G25140 (CLPB4)
Chaperones and folding catalysts [BR:ath03110]
 Heat shock proteins
  HSP100
   AT2G25140 (CLPB4)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small Clp_N AAA_5 AAA_22 AAA_16 Sigma54_activat nSTAND3 AAA_14 IstB_IS21 AAA_18 Mg_chelatase TniB AAA_28 Zeta_toxin AAA_7 AAA_3 ABC_tran NACHT ResIII Torsin T2SSE AAA_23 PduV-EutP DUF4239
Other DBs
NCBI-GeneID: 817052
NCBI-ProteinID: NP_565586
TAIR: AT2G25140
UniProt: Q8VYJ7
Position
2:complement(10697629..10702203)
AA seq 964 aa
MALRRLSKSVSSAIKAQYTLSRPSPLLRSRSLSSSPHYTSIGRPTNSFIGKINNSSITHA
TTTHGQLFPLSSPRRFCTTTAQVNQNEFTEMAWEGLINAFDAARESKQQIVESEHLMKAL
LEQKDGMARKIFTKAGIDNSSVLQATDLFISKQPTVSDASGQRLGSSLSVILENAKRHKK
DMLDSYVSVEHFLLAYYSDTRFGQEFFRDMKLDIQVLKDAIKDVRGDQRVTDRNPESKYQ
ALEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGL
AQRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVMKEVSASNGQTILFIDE
IHTVVGAGAMDGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIEKDPALERRFQQVLCV
QPSVEDTISILRGLRERYELHHGVTISDSALVSAAVLADRYITERFLPDKAIDLVDEAGA
KLKMEITSKPTELDGIDRAVIKLEMEKLSLKNDTDKASKERLQKIENDLSTLKQKQKELN
VQWEKEKSLMTKIRSFKEEIDRVNLEIESAEREYDLNRAAELKYGTLLSLQRQLEEAEKN
LTNFRQFGQSLLREVVTDLDIAEIVSKWTGIPLSNLQQSEREKLVMLEEVLHHRVIGQDM
AVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLFNTENAIVRVDMS
EYMEKHSVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHPDVFNILLQLLD
DGRITDSQGRTVSFKNCVVIMTSNIGSHHILETLRNNEDSKEAVYEIMKRQVVELARQNF
RPEFMNRIDEYIVFQPLDSNEISKIVELQMRRVKNSLEQKKIKLQYTKEAVDLLAQLGFD
PNYGARPVKRVIQQMVENEIAVGILKGDFAEEDTVLVDVDHLASDNKLVIKKLESNASAE
EMAA
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggcgctaaggagattatcaaagtctgtttcgtcagccatcaaagctcaatacactctc
tcgagaccctctcctctcctccgttctcgctctctctcttcctctcctcactacacctct
attggccggccaacaaattcattcatcggaaaaatcaataactcttctatcactcatgcg
actactactcatggtcaactcttccctctttcttctccgcgacgcttttgtactaccaca
gctcaggttaatcaaaatgagtttacggagatggcatgggaagggcttatcaacgccttt
gacgcggctcgtgaatcgaaacaacagattgtggaatctgaacatttgatgaaagctctt
cttgagcaaaaagatggtatggctagaaagattttcactaaagctggaattgacaattcc
tctgttcttcaagctacagacttgttcatatctaaacaaccaacggttagtgatgcaagt
ggtcagagactagggtcatctcttagtgttatattagaaaatgcaaagaggcataagaaa
gatatgttggatagttatgtatccgtggagcactttttgttggcttattattcagataca
aggtttggacaagagtttttcagggacatgaaacttgatattcaagtgctaaaggatgct
attaaagatgtacgcggtgatcaacgagtaactgatcggaatcctgaaagcaaatatcaa
gcacttgaaaagtatggaaatgatttaactgagatggctagacgagggaagctggatcct
gtcattgggcgggatgatgaaattaggcgttgcatccagatattatgtaggagaacaaaa
aacaatccggttattattggtgaacctggtgtagggaaaactgcaattgcagaggggttg
gctcaacgaattgtgcgaggagatgtccctgaacctctcatgaatcgaaagttgatatct
ctcgacatgggttcacttcttgctggtgccaaatttcgaggagattttgaggagaggttg
aaagcagtaatgaaggaagtatctgcttccaatgggcaaacaatcttgtttattgatgag
atccacactgttgttggtgcaggagctatggatggagcaatggatgcaagcaacctcttg
aaaccaatgcttggacgaggtgaactgagatgcattggtgcaactacactgaccgaatac
cgcaaatatatagagaaagacccagctctagagcgtaggtttcaacaagtgttatgtgtt
cagccctctgttgaagatacaatctcgattcttcgtgggttaagagagcggtacgagtta
caccatggcgttactatatcagatagtgcccttgtttcagcagcagttcttgcagaccgc
tacatcaccgaacgctttctgccagacaaagctattgatcttgttgacgaagctggtgca
aagctgaagatggagatcacttctaaaccaactgaactagatggaatagatagagctgtg
atcaaattggagatggaaaagctttctcttaaaaatgatactgataaagcatctaaagaa
cggctacagaagattgagaatgatctgtccacgctcaaacagaaacagaaagaactcaat
gtccaatgggagaaagaaaagtcgctcatgacaaaaatacgttcgtttaaggaagagatt
gatcgagttaacctcgaaattgaatctgctgaacgtgaatatgatctaaaccgagctgct
gagctgaagtatggaacacttttgtccctccaacgccaattagaagaagctgagaagaat
ctcacgaatttccgacagtttggacagtcactactccgagaagtggttaccgatcttgac
atagcagaaatagtaagcaagtggactggtattccactatctaatcttcagcaatcagag
agagagaagttagtgatgttggaagaagtgctccaccatagagttattggtcaagacatg
gctgtaaaatcagtagcagatgctatccgacgttcaagggctggtctttctgatcctaac
cgcccaatagctagtttcatgttcatgggtccaacaggtgttggtaagaccgagcttgcc
aaggctctagcgggatacctttttaacactgaaaatgcaatagtgagggtcgatatgagt
gagtacatggaaaaacactcagtctcacggcttgttggtgcaccacctggctatgtcggt
tatgaagaaggtgggcagttaactgaagttgttcgcaggagaccttactcggtggttctg
tttgatgagatcgagaaagcccaccctgatgtctttaatatcttgctacaactgctagac
gatggaagaataactgattctcaaggaaggaccgtaagtttcaaaaactgtgttgtaatt
atgacgtcgaatataggatctcaccacatacttgagaccctccgcaacaatgaagacagc
aaagaagcagtttatgagataatgaagcggcaagttgtggagttagcaagacaaaatttc
aggcctgagttcatgaacagaattgacgagtacatagttttccagccgctggattctaac
gaaatctccaaaatcgtagagttacagatgagacgggtgaagaatagcttggaacagaag
aaaatcaaacttcagtataccaaagaggcagtggatctccttgctcagcttggctttgac
cctaactacggggcaaggccggtgaagcgagtgattcaacagatggtggagaatgagatc
gctgtcgggattttgaaaggagattttgcagaagaagataccgttcttgtcgatgttgac
cacttggctagtgacaacaaattggttatcaagaagcttgagagtaatgcttcagctgaa
gaaatggccgcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (27)   
   Pfam (27)   
All databases (57)   

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