KEGG   Arabidopsis thaliana (thale cress): AT2G28000
Entry
AT2G28000         CDS       T00041                                 
Symbol
CPN60A
Name
(RefSeq) chaperonin-60alpha
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AT2G28000 (CPN60A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT2G28000 (CPN60A)
   03110 Chaperones and folding catalysts [BR:ath03110]
    AT2G28000 (CPN60A)
   03029 Mitochondrial biogenesis [BR:ath03029]
    AT2G28000 (CPN60A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT2G28000 (CPN60A)
Enzymes [BR:ath01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     AT2G28000 (CPN60A)
Messenger RNA biogenesis [BR:ath03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AT2G28000 (CPN60A)
Chaperones and folding catalysts [BR:ath03110]
 Heat shock proteins
  HSP60 / Chaperonin
   AT2G28000 (CPN60A)
Mitochondrial biogenesis [BR:ath03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    AT2G28000 (CPN60A)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT2G28000 (CPN60A)
  Exosomal proteins of other body fluids (saliva and urine)
   AT2G28000 (CPN60A)
  Exosomal proteins of breast cancer cells
   AT2G28000 (CPN60A)
  Exosomal proteins of colorectal cancer cells
   AT2G28000 (CPN60A)
  Exosomal proteins of bladder cancer cells
   AT2G28000 (CPN60A)
SSDB
Motif
Pfam: Cpn60_TCP1 Ribosomal_L29
Other DBs
NCBI-GeneID: 817344
NCBI-ProteinID: NP_180367
TAIR: AT2G28000
UniProt: P21238 A0A178VZW6
Position
2:11926446..11929488
AA seq 586 aa
MASANALSSASVLCSSRQSKLGGGNQQQGQRVSYNKRTIRRFSVRANVKEIAFDQHSRAA
LQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPNAMENAGAALIRE
VASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKAR
PVKGRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLLAEFENARVLITDQKITAIKDIIPILEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYLAMDMSLLVENATIDQ
LGIARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDA
DERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMFSDWENGYNAMTDTYENLFEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAPEGLMV
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggcgtctgcaaacgctctctcttccgcctccgtcctctgttcttcccgtcagagtaag
ttgggaggaggaaatcagcagcaaggtcagagagttagctacaacaagaggacaatcaga
cgttttagtgttagagctaatgtaaaggaaatagcttttgaccagcactctagagctgct
ctacaagctggtattgataagcttgctgattgtgttggtctcactcttggccctagaggg
aggaatgttgtgttggatgaatttggaagtcctaaggttgtgaatgatggagtcaccatt
gctagagctattgagttacctaatgccatggaaaatgctggtgcagcgcttattcgtgag
gttgcgagtaagactaatgactctgctggtgatgggacaaccactgcgtctatccttgct
cgggagataatcaaacatggattgttgagcgtcacttctggtgcgaatcccgtttcactc
aagaggggaattgataagactgttcaaggtctgatcgaagagcttcagaagaaagctagg
cccgtgaaaggtcgtgatgacatcagagctgtggcttctatctctgctggaaatgatgac
cttatagggtcaatgattgctgatgccatcgacaaagttggacctgatggtgttttgtcc
attgaatcttcatcttcttttgagaccacggtcgaagttgaagaagggatggagattgac
agaggttacatctcgcctcagtttgttacaaaccctgagaaactactagctgagtttgag
aatgctagggtattgatcactgatcagaagatcactgcgatcaaagacatcatccctatt
ttggagaagaccactcagcttcgtgctccgttgttgattattgcagaggatgttactggt
gaagccttagctacccttgtcgtgaacaagcttcgtggtgtcctcaatgttgttgccgtt
aaagcgccaggatttggagaaagaagaaaagccatgcttcaagatattgcaatcttgaca
ggagctgagtacctagccatggacatgagcttactggttgaaaacgcaaccatagatcaa
ttgggtattgcccgaaaagtcacgattagcaaagattcgactaccctcattgcagatgca
gcttccaaggacgaattacaagctcggattgctcagctgaagaaagaactattcgagact
gattctgtgtatgactcagagaagctcgctgagagaattgcgaagctatctggaggtgtt
gctgtcattaaagtcggagcagcaactgaaactgagcttgaggaccgtaagcttcgtatc
gaggatgcaaagaacgcaacatttgctgctatcgaggaaggcatagttccaggtggtggt
gctgctttggtgcatctctccactgttattcccgccattaaggagacttttgaggatgct
gatgaacgtttgggagctgacatagtacaaaaggcattgctgtcaccagctgctcttatt
gctcagaacgctggagttgaaggagaagttgttgtggaaaagattatgttcagcgattgg
gagaatgggtacaacgcaatgactgatacatatgagaatctgttcgaagctggagtgatt
gatccggctaaagtgacaagatgtgcgctacagaacgctgcttccgtagcaggaatggta
ctgaccactcaggccattgttgttgacaaaccgaaacccaaggctcctgctgctgctgct
cctgagggtctcatggtgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (3)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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