KEGG   Arabidopsis thaliana (thale cress): AT2G39230
Entry
AT2G39230         CDS       T00041                                 
Symbol
LOJ
Name
(RefSeq) LATERAL ORGAN JUNCTION
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR_2 PPR PPR_1 PPR_3 PPR_long MRP-S27 AEP1 divDNApol PMBR
Other DBs
NCBI-GeneID: 818508
NCBI-ProteinID: NP_181456
TAIR: AT2G39230
UniProt: O80958
Position
2:16381565..16384730
AA seq 867 aa
MTTFMVSKRFRPPIFLHRFINPKPISSQTRFLHPPDNQSRDISDSTTETISTLEFPHKTS
VPNHSPLTSTSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLI
HILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYI
RNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNV
TTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREM
RGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNE
LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT
MIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI
EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD
VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF
VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL
PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK
MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ
FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL
LVSGRVEKPPAASKISSLASPEMRSSY
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgactactttcatggtttccaaacgatttcgtccacctatttttctccatcgttttata
aatccaaaacccatttcttcacagactcgatttctccatccaccggataatcaaagtcga
gacatttccgattccactactgaaaccatctcaacactagaatttcctcataaaacctct
gtaccaaatcattcacctttaacttcaacctctgagactgagaatcatgtggacgacgct
cgtgtaatcgaagtgcttctaggtcgtagaaacgacccagtctcagctcttcagtactgc
aattgggtcaagcctttacatcgtctctgtgaaggtggagatgtcttctgggtacttatt
catatccttctaagctctattcacactcacgatcgtgccagcaatttgctcgtaatgttc
gtttcgaacaatccaacgctaattccaaacgtaatggttaacaatttggttgattcgtct
aaacggtttggttttgaacttaccccacgagctttcaattacttgttgaatgcttatatt
cgaaacaagcgaatggattatgctgtagattgctttggtttgatggtggatcgaaaggtt
gttccttttgtgccatatgtgaacaatgttctaagttctttagttagaagtaatttgata
gatgaagctaaggagatttataataagatggttttaattggtgttgctggtgataatgta
actacacagttgttgatgcgagctagtttgagagagaggaagcctgaagaggctgtgaaa
attttcaggagagttatgagtagaggagcagaaccagatggtttgttgtttagtcttgct
gttcaagctgcttgtaagacgccagatttggttatggctttggatttgttgagggaaatg
agggggaagttaggtgtcccggcctcgcaggaaacgtatactagtgtgattgtggctttt
gtgaaggaaggtaatatggaggaggcagtgagggttatggatgagatggttggttttggg
ataccgatgagtgtaattgctgcaacgagtttggttaatggatattgcaaggggaatgag
ttaggtaaggctttggatttgtttaatagaatggaggaggaagggctggctccggacaaa
gttatgttttcggttatggtcgaatggttttgtaagaatatggagatggagaaagctatt
gagttttatatgaggatgaaatctgtaaggattgctccttcatctgttcttgtccataca
atgatccaagggtgtttgaaagctgagtcaccagaagcggcgctagaaatctttaacgac
agttttgaaagctggattgcgcatggttttatgtgtaacaagatttttttattgttttgc
aagcaaggtaaagtcgatgctgcaacaagctttttgaagatgatggagcaaaaagggatt
gagccgaatgtagttttttacaataacatgatgcttgctcattgcagaatgaaaaacatg
gacttggctcgttcaatattttctgaaatgctggaaaagggtctagagccgaataacttc
acttattccatcttgatcgatggatttttcaagaataaggatgaacagaatgcttgggat
gtcatcaatcagatgaatgcttccaatttcgaagctaatgaagtcatatataatacgatc
atcaatggtttgtgtaaagttggtcagacgtctaaagccaaagagatgttgcaaaatttg
atcaaagaaaagcgctattccatgagttgcacgagttacaatagcatcatagatggattc
gtcaaagtaggtgatactgattccgctgtcgaaacttacagagagatgagtgaaaacggt
aaatctccaaatgttgtaaccttcaccagcttgatcaatggattctgcaaaagtaaccga
atggatctagctcttgaaatgacacacgaaatgaaaagcatggagttgaaacttgatctt
ccagcctacggtgcactaatagacgggttctgtaaaaagaatgacatgaaaaccgcatat
actttgttctctgaactgccggaactaggattgatgccaaatgtgtctgtctacaatagt
ttgatttcaggattccgtaatctgggaaagatggatgcagcgattgacttgtacaagaaa
atggtgaatgatggaataagttgtgatctgtttacatatacaacgatgatcgacgggttg
ttaaaagatggaaatataaatcttgcctctgatttgtactcggagttgcttgatttaggt
attgtccctgatgaaatcttgcacatggtacttgtcaacggtcttagtaagaagggacag
tttttgaaagctagcaagatgttagaggagatgaagaagaaagatgtgactccaaatgtg
cttctatacagtactgttattgcaggacatcatagagaaggaaatctcaatgaggctttt
agacttcatgatgagatgcttgagaaaggtattgtacatgatgatactgtattcaattta
ctcgtgagtggaagagttgagaaacctcctgctgcatccaagattagtagcttggcttct
cctgagatgagatcgagctactaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (39)   

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