KEGG   Arabidopsis thaliana (thale cress): AT2G42360
Entry
AT2G42360         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT2G42360
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT2G42360
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    AT2G42360
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-ANAPC11 zf-RING_UBOX zf-RING_16 zf-C3HC4_3 zf-RING_6 Prok-RING_4 OrfB_Zn_ribbon zf-C3H2C3 zf-RING_4
Other DBs
NCBI-GeneID: 818837
NCBI-ProteinID: NP_181765
TAIR: AT2G42360
UniProt: Q9SLC3 A0A178VW35
Position
2:17640546..17641790
AA seq 236 aa
MSSNDRDHRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRR
REAFRGLPVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDK
ARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRL
NLTVEAASSSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQDRVADLERH
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagctccaacgacagagatcatcgcaggttcaactctgaccaccactcattctggcct
aatccgtctacttacgatcttaacagcaagatcatgcttgccgcagtggcttctttatct
ggagttatcctcatcgtcttcgctcttcatctttacgcaagattcgttctccgacgccgt
agagaagctttccgtggcctccccgtcattttccgccacccttttgagatgcctaagcgt
ggcctcaatcccacagtcatcgcttctctccctactttcactgttggagccactgatggc
gtggctgcctccgctactgaatgcgcagtgtgtctaagcgtgttaaaggagcaagacaag
gcgagagagttgcccaactgcaagcacatcttccacgtcgactgtgttgacacgtggctc
accacttgctccacttgtcctgtttgtcggactgaagttgagccaagaccgagacttgag
cctgagccaagggaaggaccagtcggtactgcaccgcagttgttggtggaaaccaggctg
aacttgactgtagaagccgcatcctcttcttcctcagataacaaaacagttgtatccccg
gcttcgcgattaaattcgtttaggaaaatcttgacgagggaaagatcttcgaacaggatc
aaccattcttgtcctgaccaagatcgtgtggcagatcttgagagacattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (48)   

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