KEGG   Arabidopsis thaliana (thale cress): AT2G43970
Entry
AT2G43970         CDS       T00041                                 
Symbol
LARP6b
Name
(RefSeq) RNA-binding protein
  KO
K15191  La-related protein 7
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT2G43970 (LARP6b)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    7SK RNP complex
     AT2G43970 (LARP6b)
SSDB
Motif
Pfam: La RRM_1 PAM2
Other DBs
NCBI-GeneID: 819002
NCBI-ProteinID: NP_566004
TAIR: AT2G43970
UniProt: O80567
Position
2:complement(18205235..18208218)
AA seq 545 aa
MADQQTLDSSTPPPTQSDDLSHSHSTSSTTSASSSSDPSLLRSLSLSRLNAGAPEFVPGR
TTPPLPQPPRMIIPPPPPHGMLHMYHHQPPFNTPVLGPVPIQPHLVPVQNHHPHHRFHQH
HHHNRHQNQQYVPVRNHGEYQQRGGVGGEQEPDLVSKKNDRRDHSKRESKNDQVTETGAS
VSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIK
AVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQN
LMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERA
VTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQ
SDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQ
NHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPV
MVQAE
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggctgatcaacaaaccctagattcctctactcctcctcctactcaatccgatgatcta
tctcactcccactctacttcctctactacttcagcttcttcttcctcagatccatcactc
ttgaggtctctctccttaagtcgactcaacgccggagctcctgagttcgttcctggtcga
actactcctccgctgcctcaacctccgaggatgattatcccgcctcctccgccgcacggt
atgcttcatatgtatcaccaccagcctcctttcaatactccagttcttggtcctgttcca
atccagccacacttggttcctgttcaaaatcaccaccctcatcatcgctttcatcagcat
catcatcacaatcgtcatcagaatcagcaatatgtcccggtgaggaatcacggagagtat
cagcagcgtggtggtgtcggtggtgagcaggaaccggatttggtttcaaagaagaatgat
cggagagatcatagtaagagagaatctaagaacgatcaagtgactgaaactggagcttct
gtttctattgattcaaaaactggtttgcctgaagattctatccagaagattgtgaatcag
gttgaatactatttcagtgacttgaacttggctactacagatcatctcatgagattcatt
tgcaaggatcctgaaggatatgtgcctattcatgttgttgcgtcgttcaagaaaattaaa
gctgtcattaacaataattctcagcttgccgcagtgctacagaactcagctaagcttttt
gttagtgaagatggaaagaaagtgagacgcataagtccgattactgagtcggctatagaa
gagcttcagtctcgcattattgttgctgagaatctccctgaggatcattgctaccaaaac
ctgatgaagattttttcaactgttggaagtgtgaagaacatccgtacctgccagcctcaa
aataatggaagcggtgctccacccgcagcgagatcagcagctaaaagcgatggtacgctt
ttcagtaacaaggtccatgcttttgttgagtatgagattgttgagctagccgagagagca
gttaccgagttaagtgaagcgggaaattggaggagcggtcttaaagtccggttgatgcta
aagcatcagacgaaggaaccaaaacaaggtcaagggcgaggaagaaaaggacatgatgca
gatgtagaacatgaggaagatgatgctacaacatccgagcagcagccgattgagaaacaa
tctgatgactgttctggggaatgggatacacatatgcaagagcagccaataggagaggat
caagggaatgagaaagcggctgggcagagaaaagggcgtaacagaggtagaggaaaggga
cgaggacgagggcaaccacaccagaaccaaaaccagaacaacaaccacagccataaccaa
aaccacaaccacaatgggcgaggaaatcatcatcatcatcatcatcatcaagtgggaaca
caaccttcgaacaatccaatgaacaacatggagcaaccaggcatggggaaacagcaacca
cctggaccacgaatgcctgatgggaccagaggattctcaatgggacggggaaagccggtt
atggttcaggcagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (5)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (69)   

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