KEGG   Arabidopsis thaliana (thale cress): AT2G47030
Entry
AT2G47030         CDS       T00041                                 
Symbol
VGDH1
Name
(RefSeq) Plant invertase/pectin methylesterase inhibitor superfamily
  KO
K01051  pectinesterase [EC:3.1.1.11]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00040  Pentose and glucuronate interconversions
ath01100  Metabolic pathways
Module
ath_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AT2G47030 (VGDH1)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     AT2G47030 (VGDH1)
SSDB
Motif
Pfam: Pectinesterase PMEI Ubiq_cyt_C_chap
Other DBs
NCBI-GeneID: 819317
NCBI-ProteinID: NP_182226
TAIR: AT2G47030
UniProt: O80722
Position
2:complement(19324134..19326484)
AA seq 588 aa
MIGKVVVSVASILLIVGVAIGVVAFINKNGDANLSPQMKAVQGICQSTSDKASCVKTLEP
VKSEDPNKLIKAFMLATKDELTKSSNFTGQTEVNMGSSISPNNKAVLDYCKRVFMYALED
LATIIEEMGEDLSQIGSKIDQLKQWLIGVYNYQTDCLDDIEEDDLRKAIGEGIANSKILT
TNAIDIFHTVVSAMAKINNKVDDLKNMTGGIPTPGAPPVVDESPVADPDGPARRLLEDID
ETGIPTWVSGADRKLMAKAGRGRRGGRGGGARVRTNFVVAKDGSGQFKTVQQAVDACPEN
NRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQ
VESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNC
VVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPD
RKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNR
GPGAFANRRVNWAKVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgattggaaaagttgtggtctcggtggcctccatcctcttaatagtcggagttgccata
ggagtcgttgccttcataaacaaaaatggcgatgctaatctgtctccccaaatgaaagcg
gttcaaggaatttgccagtcgacatccgacaaagcctcatgtgtcaaaactctcgagccg
gtcaagagcgaggacccaaacaagctgatcaaggctttcatgctcgctacaaaagacgaa
ttaaccaaatcgtctaacttcacgggtcaaaccgaagtaaacatgggctcgagcatctcg
ccaaacaacaaagccgttcttgattactgcaagagagttttcatgtacgctcttgaggat
ctcgctaccattattgaagaaatgggtgaagatcttagccagatcgggagcaaaatcgac
cagctcaaacaatggttaatcggtgtttacaattaccaaactgattgtcttgacgatatc
gaagaagatgatttaagaaaggcgattggtgagggcattgcaaactccaagattctcact
accaacgctattgacatcttccacactgtcgttagcgccatggccaagattaacaacaag
gttgacgacttgaagaacatgacaggcggaatccccactcccggagcccctcctgttgtt
gatgaatctcccgtggccgacccagatggtcctgctcgtcgtcttcttgaagacattgac
gagaccggaatcccaacatgggtttcaggtgctgacaggaagctcatggctaaggctgga
cgtggccgtagaggcggccgcggaggcggtgctagggtcagaacgaactttgtggtggct
aaggatggaagcggacagtttaagacggttcaacaagccgttgatgcttgtcctgagaat
aaccgaggccgatgcatcatctacatcaaggccggtctctacagagagcaagtaatcatc
cctaagaagaagaacaacatcttcatgtttggagatggtgcaagaaagaccgtcatttct
tacaacagaagtgttgctctcagccgtggaaccaccacatccctcagtgccacagttcag
gttgaatcggaaggattcatggcgaaatggatgggattcaagaacaccgccggtccaatg
ggacaccaagccgcggctatccgagtgaacggagaccgtgccgtgatcttcaactgcaga
ttcgacggttatcaagacacattgtacgttaacaacggtcgtcagttctacagaaactgt
gtggtctcgggaacagtagacttcatcttcggcaaatccgcaaccgtgatccaaaacaca
ctaattgttgtccgtaaaggaagcaagggacaatacaacacggtcacagccgatggaaac
gaattgggcttagggatgaaaattggtatcgtcctccaaaactgccgcatcgtgcccgac
aggaaactaacgccagagagacttacggtggcgacatacttgggaaggccgtggaagaaa
ttctcgaccaccgtgataatgagcaccgagatgggagatttgattagaccagaagggtgg
aagatttgggatggggaaagtttccacaagtcatgtaggtacgttgagtacaacaaccgt
ggaccaggagcattcgctaacagaagagttaactgggctaaggttgccaggtctgcagct
gaggtcaatggcttcacagctgctaactggttaggtcctattaactggattcaagaagcc
aatgttcctgtcacaattggattataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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