KEGG   Arabidopsis thaliana (thale cress): AT2G47580
Entry
AT2G47580         CDS       T00041                                 
Symbol
U1A
Name
(RefSeq) spliceosomal protein U1A
  KO
K11091  U1 small nuclear ribonucleoprotein A
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT2G47580 (U1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT2G47580 (U1A)
Spliceosome [BR:ath03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    AT2G47580 (U1A)
 Complex B
    AT2G47580 (U1A)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded xRRM Calcipressin DUF4523
Other DBs
NCBI-GeneID: 819371
NCBI-ProteinID: NP_182280
TAIR: AT2G47580
UniProt: Q39244 A0A178VZ67
Position
2:19517187..19518913
AA seq 250 aa
MEMQEANQGGGSEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHK
GQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEE
KGGGKKKKDQHHDSTQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILF
VQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKIQQ
NQMLITYAKK
NT seq 753 nt   +upstreamnt  +downstreamnt
atggagatgcaagaggctaatcaaggaggaggatcggaggtttctccgaatcagacgatt
tacatcaacaatctcaacgaaaaagtgaagcttgatgagctgaagaaatcgctgaatgca
gtgttctctcagttcgggaagatactggagatattggcgtttaagacctttaagcacaaa
ggacaagcttgggtagtcttcgacaacaccgagtctgcttccactgctattgctaaaatg
aataattttcctttctacgacaaggagatgagaatacaatatgccaaaacaaaatcagat
gttgttgccaaggccgatggtacatttgttcctcgcgagaagagaaagagacatgaggag
aaaggaggcggcaagaaaaagaaagaccagcaccatgattctacacagatgggcatgccc
atgaactcagcatatccaggtgtctatggagctgcacctcctctatcgcaagtaccatac
cctggtggtatgaaacccaatatgcccgaggcaccagctccgccaaataatattctcttt
gtccaaaaccttcctcacgagacaactccaatggtgcttcagatgttgttctgccagtac
caaggatttaaggaagttagaatgattgaagccaaaccgggaatcgcctttgtggagttt
gctgatgagatgcagtcgacggtcgcaatgcagggacttcaaggtttcaagattcagcaa
aaccagatgctcatcacgtatgccaagaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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