KEGG   Arabidopsis thaliana (thale cress): AT3G03300
Entry
AT3G03300         CDS       T00041                                 
Symbol
DCL2
Name
(RefSeq) dicer-like 2
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G03300 (DCL2)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    AT3G03300 (DCL2)
   microRNA pathway
    RISC loading complex
     AT3G03300 (DCL2)
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer Helicase_C PAZ DEAD ResIII dsrm AAA_22
Other DBs
NCBI-GeneID: 821300
NCBI-ProteinID: NP_566199
TAIR: AT3G03300
UniProt: Q3EBC8
Position
3:complement(767880..776214)
AA seq 1388 aa
MTMDADAMETETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRS
YAYLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVD
KYEVLVMTPAILLDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTS
NVPRIFGMTASLVKTKGENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKY
YQHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDL
GILLAQKAAQSLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVANIN
GNAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTK
YVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNIC
SFIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDS
DEPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCP
VKEVKAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPC
YFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLEDH
RGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVENLMEALNGLHLRDGVALDY
LLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNA
LVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRH
IFTLHSYLHMAKKKKEKEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLL
IAYNLKKSIPKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTH
HEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLPE
SRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQRDSP
IQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLIT
KHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFE
QSSLQSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVK
LHPVRELTELCQKWQFELSKAKDFDSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLN
LLKNSLDY
NT seq 4167 nt   +upstreamnt  +downstreamnt
atgaccatggatgctgatgcgatggaaactgagaccactgatcaagtctctgcttctcct
ctacattttgccagaagttatcaggtagaggcacttgagaaagctatcaagcagaacact
attgtcttcttggagactggttctggcaagacccttattgctattatgcttcttcgtagc
tatgcctaccttttccgcaagccttcaccatgcttctgtgtcttcttggttcctcaagtg
gttcttgtcactcagcaagcagaagccctgaagatgcatactgatctaaaagttggtatg
tattggggagacatgggggtggacttttgggattcttcaacatggaaacaagaagttgat
aaatatgaggttctggtgatgacccctgccattttgctcgacgcgttgaggcatagtttt
ctgagcttgagcatgatcaaggttctaatagttgatgagtgtcatcatgcagggggaaag
cacccttatgcttgtatcatgagggagttctatcataaggagttaaattctggaacttcc
aatgttccacggatatttgggatgactgcttcacttgtgaaaacaaagggtgaaaatctg
gatagctactggaaaaaaattcatgaactcgaaactctaatgaattcaaaggtctatacc
tgtgagaatgagtctgtgctggctgggtttgtccccttttctacaccaagcttcaagtat
taccagcacataaaaataccaagtcccaaacgagcaagcttggtagagaagctagaaaga
ctaacgataaagcatcgcttatcccttggaaccttggatctcaactcctctactgttgat
tctgtagagaagagactgttgaggataagttcaactctaacatattgtttggatgatctc
ggaattttgctggcccagaaggctgctcagtcattgtcagccagtcagaatgactctttc
ttgtggggcgaactaaatatgtttagcgtggccttggtaaaaaaattctgctctgatgct
tcacaggagtttttggctgagatacctcaaggtcttaattggagtgttgcaaacataaat
ggaaatgcggaggcaggtctcctaactttaaaaactgtctgcctcattgagactcttctt
ggttatagctccttggagaacatacggtgcatcatttttgtggatagggtgataacagcc
atcgttctggaatcccttttggctgagattcttccaaactgtaataactggaaaaccaag
tacgttgcaggaaataactctggtctgcaaaatcaaactcggaagaagcaaaatgaaatt
gtggaagacttccggagaggcttggttaacatcattgtagcaacatctattctagaggag
ggtctagatgttcaaagttgcaacctggttatcagatttgaccctgcatccaacatttgc
agtttcatacagtctcgtgggcgtgctagaatgcaaaattcagattatttgatgatggtg
gaaagcggagatctgttaacacaatctcgattaatgaaatatctttctggtgggaaaaga
atgcgcgaagagtctttggatcattctcttgttccctgtccacctcttccagatgattca
gatgaaccactcttccgtgtcgaaagtactggagcaactgtaactcttagctcaagcgtc
agcttaatatatcattactgctcaaggcttccttcagatgagtacttcaaaccagcccct
agatttgatgtaaacaaggatcaggggagttgcaccctttaccttcctaagagttgccca
gtaaaagaagttaaagctgaagcaaataataaagtgttaaaacaagctgtctgtcttaaa
gcttgcattcaactgcacaaagttggagctctaagtgatcatcttgtgcctgacatggtt
gtggcggaaactgtctcacaaaaactcgagaaaatccaatataacacagagcagccatgt
tacttccccccagagctagtctcccagttttcagcacagccggagacaacataccacttc
tacttaataagaatgaagccaaactctccaagaaattttcatttaaacgatgttttacta
ggcaccagagttgtgcttgaagatgacattgggaacacaagcttccggttggaagatcat
aggggtacaatagctgtgacattgagttatgtgggagcttttcaccttacacaagaagag
gtccttttctgtagaagatttcagataactctattccgagttcttttagatcacagtgtg
gaaaatttgatggaggcattgaatggattgcatctcagagatggggtggcacttgattat
ctactagttccatccactcattcacatgaaacatctcttattgattgggaagtgatcaga
tccgtgaatctaacttctcatgaggttttggaaaaacacgaaaattgttctaccaacggt
gcttctcgcattctacacacaaaagacggcttgttttgtacttgtgtcgtacaaaatgca
ttggtttacacaccacataatggatacgtctactgcacaaaaggtgttctcaacaatcta
aacggaaattcattattgaccaagagaaattctggcgatcagacttacattgagtactac
gaggaaaggcatgggattcaattaaattttgtggatgaacctcttctaaatggaagacac
attttcacgttgcatagttatcttcacatggccaagaagaagaaggagaaagagcatgac
agggaatttgttgaactacctcctgagctttgtcatgtcattttgtccccaatatcagtt
gatatgatctattcatatacttttatcccatctgttatgcaacgcattgaatctttgctt
atagcatacaacctgaagaaaagcatcccaaaagtcaatattccaaccattaaggttttg
gaagctattacgacaaagaagtgcgaagatcagttccacttggaatcactagaaactctt
ggtgactcttttctgaaatatgctgtttgtcagcaactattccaacactgtcatactcac
catgagggtcttcttagcacgaagaaagatggaatgatttcaaatgtcatgctctgccaa
tttggatgtcagcagaaacttcagggatttatccgcgatgagtgttttgaacccaaaggt
tggatggttccaggtcaatcatctgcagcttattcacttgtaaacgatactctacccgag
tctagaaacatatacgttgctagtaggaggaatctgaaacgcaagagtgtggccgatgtt
gtagaatcattaattggagcatatctcagcgagggaggtgaacttgcagctttgatgttc
atgaattgggttggaataaaggtcgactttacaactacgaagatccagagagattcccca
atacaagcagagaagcttgtgaatgtaggttatatggagtcgctgttgaattacagtttt
gaggataagtctcttctagttgaagcattgactcatggttcatacatgatgcctgaaatt
ccaagatgctatcagcggttggagttcctcggtgactctgtattggattatctcataacc
aagcatctatacgacaaatatccttgtctgtcccctggactattaaccgacatgcgatca
gcttctgttaacaatgaatgttatgccctagtggcggtgaaagcaaacctgcacaaacac
atcctgtacgcctctcatcatctccataagcacatctctagaactgtcagtgagtttgaa
cagtcttctttgcaatccactttcggatgggaatccgatatatcttttccaaaggttctt
ggagatgtgatagaatctctagcaggcgcgatatttgttgactcaggttacaacaaggaa
gtagtgtttgcaagtattaaaccacttttgggttgtatgataactccagagactgtcaag
ttgcatcctgtgagagagttgacagaattatgtcagaagtggcagttcgagttgagtaaa
gctaaagatttcgattctttcacggttgaggtgaaagctaaggagatgagttttgctcac
acagcaaaggcctctgataagaaaatggccaagaaattggcttacaaagaagtcttgaac
ttacttaagaacagcctggactactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (62)   

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