KEGG   Arabidopsis thaliana (thale cress): AT3G05200
Entry
AT3G05200         CDS       T00041                                 
Symbol
ATL6
Name
(RefSeq) RING/U-box superfamily protein
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT3G05200 (ATL6)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT3G05200 (ATL6)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    AT3G05200 (ATL6)
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_UBOX zf-RING_5 zf-Nse zf-RING_16 zf-C3HC4_3 Prok-RING_1 zinc_ribbon_16 RINGv Prok-RING_4 zf-RING-like PHD zf-RING_4
Other DBs
NCBI-GeneID: 819684
NCBI-ProteinID: NP_566249
TAIR: AT3G05200
UniProt: Q8RXX9 A0A178V9T3
Position
3:1476960..1478850
AA seq 398 aa
MRSSDHMAFAGVLPIVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAAL
FFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQK
LGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEG
ESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSEVDSRRLPGVPVDLKRVKFSRSHT
TGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKPIDRSRAR
SDRWLFRKTPSFLWRSRDDGSIRLGATGSVRASAVPNSTGSDSVRAGDRWAFLRNASFLW
RNSSVHVPRGGVNKDGEGTSVKSTGASGSTSGSVRLPV
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgagaagctccgatcatatggcgtttgccggcgttttgccgattgttttcttgcttata
ttatcatcagcggatctagcagcgagtcaatcacagcccggtccaacaaatcaaccgtat
aactacggcagactaagtccagccatggcagtgatcgtcgtgatcctaatcgctgctctc
ttcttcatgggcttcttctctatctacttccgtcactgctcaggcgtaccagacgccggt
gtttctccagctggtggagctagatccagagcaaccgtcaacgcggcggcgcgtggtctc
gacgtttcagttgtcgagacttttcctacgttcttgtactcagatgtgaaaacgcagaag
cttggtaaaggagagttagagtgtgcgatatgtttgaacgagttcgaagacgacgaaacg
ctgcgtttgcttcccaagtgtgatcacgtgtttcatccgcactgcatcgatgcttggctc
gaggctcacgtgacttgtcccgtttgcagagcgaatcttgctgaacaggtagctgaaggt
gagtcagttgaaccgggaggaactgaaccggatcttgaattgcagcaggttgtggtgaat
cctgaaccggtggttactgcaccggtaccggaacaattggtgactagtgaagtcgattcg
aggagattacctggtgtaccggtggatcttaaaagagttaaattctcgagatcgcatacg
acgggacattcggtggttcaaccgggagaatgtaccgaacggtttactcttcggttaccg
gaagatgtgaggaagaggataatgaaggattggaaattgaaccggacgaatagtcttctg
gttcttcctagaggagggagttcgaggagaggtaaaccgattgaccggtcaagggctcgg
tctgatcgatggttgtttcgtaaaacgccttcgtttctgtggaggagtcgtgatgatggt
tcgattaggttaggtgctaccggtagcgttcgagccagtgctgtaccgaattcaaccggt
agtgattcggtacgtgcaggagaccggtgggcttttcttagaaacgcgtcgtttttgtgg
aggaactcttcggtacatgtgccaagaggaggagtcaataaagacggcgaaggaacttcg
gttaaatcgaccggtgcaagtggctcaactagcggttcggtgagattaccggtttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (43)   

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