KEGG   Arabidopsis thaliana (thale cress): AT3G06060
Entry
AT3G06060         CDS       T00041                                 

Gene name
TSC10A
Definition
(RefSeq) NAD(P)-binding Rossmann-fold superfamily protein
  KO
K04708  3-dehydrosphinganine reductase [EC:1.1.1.102]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00600  Sphingolipid metabolism
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    AT3G06060 (TSC10A)
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.102  3-dehydrosphinganine reductase
     AT3G06060 (TSC10A)
SSDB
Motif
Pfam: adh_short adh_short_C2 KR Epimerase GDP_Man_Dehyd NAD_binding_10 RmlD_sub_bind Glyco_tran_WecB DFP Sacchrp_dh_NADP ApbA
Other DBs
NCBI-GeneID: 819779
NCBI-ProteinID: NP_187257
MIPS: AT3G06060.1
TAIR: AT3G06060
UniProt: Q0WRJ2
Position
3
AA seq 326 aa
MAAISPLFLLFLIPIIPLSLLAILALIVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAA
SEGARVSILARSGSKLEEAKKSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVN
QGVFTAKELVKHSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQV
GVYGYAAYSASKFGLQGLAQALQQEVISDDIHVTLIFPPDTNTPGFEEEQKSRPEVTAII
AASSGSMETEEVAKKAMDGIKAGNFTVSCNFEGFLLSLATTGMSPQRSFWLAFLEVITAG
PIRLIALFFQWDWYKAIEKWSKTKTK
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcggccatttctcctctcttccttctcttcctcattcccattatcccactatcgctt
ctcgctatcttagccctaattgtacgtcctcgtcccattaagatccctatcaagtcccgt
cacgccttcatcaccggtggatctagcggcatcggtcttgctctcgcccaccgcgccgct
tccgagggcgctcgtgtctcaatcctcgcccgatccggatcaaagctcgaggaggctaag
aaatcgatccagctcgccactggtgtcgaagtcgccacattctctgcagacgttcgcgat
tacgatgcagtctcgaaggcgatagatgaatcgggaccgatcgatgtgttgattgttaac
caaggtgtgtttacggcgaaggagctggtgaaacatagtcctgaagatgtcaaattcacg
attgacgtaaatcttgttgggagcttcaatgtgattaaagccgctttgcctgccatgaaa
gcaaggaaagatcgtggacctgcttccatcagtctcgtctcctctcaagctggtcaggtt
ggtgtctatggttatgctgcatattcagcaagcaagtttggtcttcagggtttagcgcaa
gcattgcaacaggaagttatatctgatgatattcatgtcactcttatttttcctcctgac
actaatacacccggctttgaagaagaacagaagagcagacctgaagtcactgccataata
gctgcatcctctggttcaatggaaacagaagaagtagcaaaaaaggctatggatggcata
aaagcaggaaacttcaccgtctcatgcaactttgagggattcttactgtctctcgcgaca
accggcatgtcccctcaaagatcattttggcttgcttttcttgaagttataaccgcaggg
cctataagattaatcgctctcttctttcaatgggattggtataaagccattgaaaaatgg
agcaaaaccaaaaccaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   MIPS (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (41)   

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