KEGG   Arabidopsis thaliana (thale cress): AT3G06400
Entry
AT3G06400         CDS       T00041                                 
Symbol
CHR11
Name
(RefSeq) chromatin-remodeling protein 11
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AT3G06400 (CHR11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT3G06400 (CHR11)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G06400 (CHR11)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     AT3G06400 (CHR11)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    AT3G06400 (CHR11)
   RSF complex
    AT3G06400 (CHR11)
   WICH complex
    AT3G06400 (CHR11)
   B-WICH complex
    AT3G06400 (CHR11)
   NORC complex
    AT3G06400 (CHR11)
   BRF complex
    AT3G06400 (CHR11)
   NuRF complex (fruit fly)
    AT3G06400 (CHR11)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C ResIII HAND DEAD Myb_DNA-binding HDA2-3 DBINO CHDII_SANT-like AAA_14 DUF1509
Other DBs
NCBI-GeneID: 819814
NCBI-ProteinID: NP_001189827
TAIR: AT3G06400
UniProt: Q8RWY3 A0A178VF59
Position
3:1940907..1946980
AA seq 1056 aa
MARNSNSDEAFSSEEEEERVKDNEEEDEEELEAVARSSGSDDDEVAAADESPVSDGEAAP
VEDDYEDEEDEEKAEISKREKARLKEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKY
LLQQTELFAHFAKSDGSSSQKKAKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLLT
QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGP
HMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAI
KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL
NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI
LKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYT
TGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNT
GGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRA
HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVR
YGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFDD
DNKDENKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGAPAKPKEPRIPRMPQLH
DFQFFNIQRLTELYEKEVRYLMQTHQKNQLKDTIDVEEPEEGGDPLTTEEVEEKEGLLEE
GFSTWSRRDFNTFLRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRI
IKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMIH
KLGYGNWDELKAAFRTSSVFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQAR
KEKKLAKSATPSKRPLGRQASESPSSTKKRKHLSMR
NT seq 3171 nt   +upstreamnt  +downstreamnt
atggcgagaaattcgaattccgatgaggctttctcgtcagaggaggaagaagagcgggtt
aaggataatgaagaagaagatgaggaggagctcgaggctgttgctcgttcttctggctcc
gacgatgacgaagtagccgccgccgacgaatcaccagtctccgacggagaggctgctccc
gtagaagatgattacgaggacgaagaagatgaggaaaaagctgaaatcagcaaacgtgag
aaagccagacttaaagagatgcagaagttgaagaagcagaagattcaagagatgctggag
tcgcagaatgcttccattgacgcggatatgaacaataagggaaaagggagactgaagtat
cttctgcagcaaactgagttatttgcccactttgctaaaagtgatggatcttcttctcag
aagaaggcaaaaggaaggggacgtcatgcttccaaaataactgaagaggaggaagacgaa
gagtatctaaaggaagaagaggatggcttaactggatctggaaacacacggttactcaca
cagccctcttgtattcaagggaagatgagagattaccaattagctggtttgaactggctc
attcgtctttatgagaatggcataaatggaattcttgctgatgaaatgggtctggggaag
acgcttcaaacgatttctttgttggcatatcttcatgaatacaggggaatcaatggtccc
catatggtggttgctccaaaatcaacacttggtaattggatgaacgaaattcgccggttt
tgtcctgtcctacgtgctgtgaagttccttggtaatcctgaggagaggagacatattcga
gaagacctgctagttgctgggaaatttgatatttgtgtcacaagctttgagatggccatc
aaagagaagacagcacttcgtcggtttagctggcgttatattatcattgatgaagcgcat
cgaatcaagaacgagaattcactcctttctaaaaccatgagactttttagcaccaattat
cggcttcttatcacggggaccccccttcagaataatctccatgaactgtgggctcttcta
aattttcttctgcctgagatttttagttcagcagagacttttgatgaatggtttcaaatt
tctggtgagaatgaccagcaagaagttgtgcaacaactgcacaaggttcttcgaccattt
cttcttcgaagactaaagtcagatgttgagaaaggtttgccaccgaagaaggagaccata
cttaaagttggtatgtctcagatgcaaaagcaatactacaaggctttactgcagaaggat
cttgaagcggttaatgctggtggagaacgcaaacgtctgctaaacattgcaatgcaactg
cgtaaatgctgcaatcacccctatctcttccagggtgcagaacctggtcccccatatacc
acaggagatcaccttataacaaatgctggtaagatggttctcttggataaattgcttcct
aagttgaaagaacgtgattcaagggtgctgatattttctcagatgacaagacttttggat
attcttgaggactatttaatgtatcgtggttacttgtattgccgtattgatggaaacact
ggtggtgacgaacgagatgcctccatagaagcctacaacaagccaggaagtgagaaattt
gttttcttgttatctactagagctggagggcttggtatcaatcttgctactgcagatgtt
gtgatcctttacgatagtgattggaacccacaagtcgacttgcaagctcaggatcgtgcc
cataggattggtcaaaaaaaagaagttcaagtgtttcgattctgcactgagtctgctatt
gaggagaaagtgattgaaagagcttacaagaagttagcacttgatgctctggttattcaa
caagggagattggcagaacagaaaactgtcaataaggatgagttgcttcaaatggtaaga
tatggtgctgagatggtgttcagttctaaagatagcacaatcacagacgaggatattgat
agaatcattgccaaaggagaagaggcaacagctgaacttgatgctaagatgaagaaattc
acagaagatgctatacagtttaaaatggatgacagtgctgacttctatgattttgatgat
gacaataaggatgaaaacaagctcgattttaaaaagattgtaagcgacaattggaatgat
ccccccaagcgggagagaaagcgcaactactctgaatctgagtactttaagcaaacattg
cggcaaggtgctccagctaaacctaaagagcctagaattccgcgcatgccccagttgcac
gatttccagttctttaacattcagagattgaccgagttgtatgaaaaggaagtacgttat
ctcatgcaaacacatcagaaaaatcagttgaaagacacaattgatgttgaagaaccagaa
gaaggtggggatcccttaactactgaagaagtagaagaaaaggagggattattggaggag
ggtttctcaacatggagcagaagagattttaatactttcctcagggcttgtgagaagtat
ggccgcaacgacataaaaagcattgcctctgagatggaagggaaaacagaggaagaagtt
gaaagatatgccaaagtatttaaagagcggtacaaggagctgaacgactatgatagaatc
attaagaacattgagaggggagaggcaaggatctctaggaaagacgaaatcatgaaggcc
atagggaagaaactggatcgctacagaaacccttggctggaactgaagattcaatatggt
cagaacaaaggcaagctgtacaatgaagagtgtgaccgtttcatgatctgcatgattcac
aaacttggttatgggaattgggatgagctaaaggcagcatttaggacatcgtctgtgttc
aggtttgactggtttgtgaaatcccgcacgagtcaggaacttgcaagaagatgcgacact
ctgattcgactgatcgagaaagagaaccaggagtttgatgaaagagagaggcaagcccgc
aaagagaagaagctcgcgaagagtgcaacaccatcaaagcgacctttaggaagacaagca
agtgagagtccttcatcgacgaagaagcggaagcacctgtcgatgagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (12)   
   Pfam (12)   
All databases (44)   

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