KEGG   Arabidopsis thaliana (thale cress): AT3G08940
Entry
AT3G08940         CDS       T00041                                 
Symbol
LHCB4.2
Name
(RefSeq) light harvesting complex photosystem II
  KO
K08915  light-harvesting complex II chlorophyll a/b binding protein 4
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00196  Photosynthesis - antenna proteins
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09102 Energy metabolism
   00196 Photosynthesis - antenna proteins
    AT3G08940 (LHCB4.2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:ath00194]
    AT3G08940 (LHCB4.2)
Photosynthesis proteins [BR:ath00194]
 Antenna proteins
  Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
   LHCII
    AT3G08940 (LHCB4.2)
SSDB
Motif
Pfam: Chloroa_b-bind
Other DBs
NCBI-GeneID: 820043
NCBI-ProteinID: NP_187506
TAIR: AT3G08940
UniProt: Q9XF88
Position
3:2717557..2718923
AA seq 287 aa
MAATSTAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAK
SPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTP
FQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQP
LPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEI
KHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
NT seq 864 nt   +upstreamnt  +downstreamnt
atggccgccacttcaaccgccgctgctgcttcttcaatcatgggtacccgggtggtttcc
gacattagctccaattcaagccggttcacagcccggttcggattcggaaccaagaaagca
tctcccaaaaaggctaagacggttatctcagaccggcctctatggttcccaggcgcaaaa
tcacccgaatatctcgacggttcacttgtcggggactacgggttcgatccttttggttta
ggcaaaccggcggagtatctccaattcgatttggattccttggaccagaacttagccaag
aacttatacggagaagtgatcgggactcgtaccgaggcggtggaccccaaatcgacgccg
tttcagccatatagtgaagtcttcgggctacaaagattcagagaatgtgagctgattcac
ggtcggtgggcaatgctcgccactcttggcgctatcaccgtcgaatggctcaccggtgtt
acttggcaagacgccggcaaggtagagctagtggatggatcatcttacttaggacagcca
ttgccgttctctatctcgacattgatatggatcgaagtgttagtgatcggctacattgag
ttccaacgaaacgctgaactggactcggagaagcgtttgtatccaggaggcaagttcttt
gacccgttaggactagcgtctgacccggtgaagaaggctcagcttcagctagctgagatc
aaacatgctcgtttagccatggttggattcttgggttttgcggttcaggcggctgcaacc
ggtaaaggaccgctcaacaactgggcgactcaccttagtgacccacttcacaccaccatt
atcgataccttctcttcctcctga

  All links  
Gene (10)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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