KEGG   Arabidopsis thaliana (thale cress): AT3G15720
Entry
AT3G15720         CDS       T00041                                 
Name
(RefSeq) Pectin lyase-like superfamily protein
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00040  Pentose and glucuronate interconversions
ath01100  Metabolic pathways
Module
ath_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AT3G15720
Enzymes [BR:ath01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     AT3G15720
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 End_N_terminal
Other DBs
NCBI-GeneID: 820815
NCBI-ProteinID: NP_566524
TAIR: AT3G15720
UniProt: Q9LW07
Position
3:complement(5325127..5327672)
AA seq 456 aa
MKKKTWFLNFSLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFV
VPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGNWKGDKDQWILFTDIEGLVIEGD
GEINGQGSSWWEHKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRIN
APESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSL
GKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQF
YNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETA
SSGSGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSAQLLEQTCMSAQSVQPRTTTQP
MQDPIWVFQSRGKQLRVYNIAILVSFISLVTYILAR
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaagaagaagacttggttcttgaatttctcactgttctttcttcaaatcttcacatct
tcgaatgcattggatgttactcaattcggagcggttggagatggagttacagacgattca
caggcgttcttgaaagcttgggaagctgtgtgtagcggaacaggagatgggcagtttgtc
gttccggcagggatgacatttatgttacagcccctgaagtttcaagggtcttgcaaatcc
acccctgtttttgttcagatgttaggcaagctggttgcaccgagtaaaggaaattggaaa
ggggacaaagatcaatggattctttttacagacattgaaggacttgtgattgaaggtgac
ggtgaaattaacggccagggttcgagctggtgggaacacaaaggctctagacctaccgca
ttgaagttcaggagctgcaacaaccttagattgagtgggttaacgcatttagatagtcca
atggctcacattcacataagcgagtgcaactatgtgaccatctcaagcctacgaataaat
gcacctgaatcaagtcctaacaccgatggaatcgacgtaggggcttcatccaacgttgtc
atccaggattgcatcatcgcaaccggtgatgattgcattgcgattaattcggggacgtct
aacatccacatttccggtatagattgcggaccaggccatgggataagcataggaagcttg
ggaaaagatggagagacagctacagtggagaatgtatgtgtccaaaactgtaactttaga
ggaactatgaatggagctcggatcaaaacttggcagggcggatcgggttacgcgagaatg
attactttcaatggaattactctagacaatgttgaaaatccaatcataatcgatcagttc
tataacggtggcgattccgataatgccaaagatcgtaagtcgtcggcagtggaagtgagc
aaagtggtgtttagtaatttcattgggacgtcaaagtcagagtacggtgttgacttccga
tgcagcgagagagttccatgcacagagattttcttgagagacatgaaaatagaaacggca
tcatcaggatcaggacaagtcgcacaaggacagtgtttaaacgtgagaggtgcgtctaca
attgctgtaccaggtctagaatgtttagaactttccacagatatgttttcatcggcgcaa
ttgctggaacaaacttgcatgtcggcacaatcagtgcaaccaagaacaacaacacaaccg
atgcaagatccaatatgggtttttcaaagcagagggaaacaacttagagtttacaatatt
gccatattagtttcatttatctctttggttacatatattttagctagatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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