KEGG   Arabidopsis thaliana (thale cress): AT3G16950
Entry
AT3G16950         CDS       T00041                                 
Symbol
LPD1
Name
(RefSeq) lipoamide dehydrogenase 1
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00010  Glycolysis / Gluconeogenesis
ath00020  Citrate cycle (TCA cycle)
ath00260  Glycine, serine and threonine metabolism
ath00280  Valine, leucine and isoleucine degradation
ath00310  Lysine degradation
ath00380  Tryptophan metabolism
ath00620  Pyruvate metabolism
ath00630  Glyoxylate and dicarboxylate metabolism
ath00640  Propanoate metabolism
ath00785  Lipoic acid metabolism
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
ath01200  Carbon metabolism
ath01210  2-Oxocarboxylic acid metabolism
ath01240  Biosynthesis of cofactors
Module
ath_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ath_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ath_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
ath_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ath_M00532  Photorespiration
ath_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AT3G16950 (LPD1)
   00020 Citrate cycle (TCA cycle)
    AT3G16950 (LPD1)
   00620 Pyruvate metabolism
    AT3G16950 (LPD1)
   00630 Glyoxylate and dicarboxylate metabolism
    AT3G16950 (LPD1)
   00640 Propanoate metabolism
    AT3G16950 (LPD1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AT3G16950 (LPD1)
   00280 Valine, leucine and isoleucine degradation
    AT3G16950 (LPD1)
   00310 Lysine degradation
    AT3G16950 (LPD1)
   00380 Tryptophan metabolism
    AT3G16950 (LPD1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AT3G16950 (LPD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT3G16950 (LPD1)
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AT3G16950 (LPD1)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AT3G16950 (LPD1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 GIDA FAD_oxidored Lys_Orn_oxgnase DAO Thi4 UDPG_MGDP_dh_N
Other DBs
NCBI-GeneID: 820951
NCBI-ProteinID: NP_001078165
TAIR: AT3G16950
UniProt: A8MS68 A0A654F7Y2
Position
3:complement(5786298..5790536)
AA seq 623 aa
MQSAMALSFSQTSFTRPNHVLGSSGSVFSTPRSLRFCGLRREAFGFSTSNQLAIRSNRIQ
FLSRKSFQVSASASSNGNGAPPKSFDYDLIIIGAGVGGHGAALHAVEKGLKTAIIEGDVV
GGTCVNRGCVPSKALLAVSGRMRELQNEHHMKSFGLQVSAAGYDRQGVADHANNLATKIR
NNLTNSMKAIGVDILTGFGSVLGPQKVKYGKDNIITAKDIIIATGSVPFVPKGIEVDGKT
VITSDHALKLESVPEWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKL
AQRVLINPRKIDYHTGVFASKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAP
FTNGLGLENVNVVTQRGFIPVDERMRVIDGKGTLVPNLYCIGDANGKLMLAHAASAQGIS
VVEQVSGRDHVLNHLSIPAACFTHPEISMVGLTEPQAKEKGEKEGFKVSVVKTSFKANTK
ALAENEGEGIAKMIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKLAVHAHP
TLSEVLDELFKAAKVESHATTRTGDAKIKLNTNQEDRKGRRRGGDDEKQPSVSKDLKDIS
TRPSSFFENISVGVLSLLSLIFV
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgcaatcagctatggcgctttcgttctcccagacgtcgtttacaagaccaaaccacgtg
ctcggatcatctggttctgttttctctacgcccagaagtctccggttctgcggactccgg
cgggaagcgtttggtttctcaacgtcgaatcagttggctattcgcagtaaccgaatccaa
tttctaagtaggaagtcattccaagtctccgcttctgcttcaagtaatggtaatggcgct
ccaccgaaatctttcgattacgatttgatcatcatcggagctggagttggtggccacgga
gctgctttgcacgccgttgaaaagggacttaaaacagccattattgaaggagatgttgtt
ggagggacttgtgttaacagaggatgtgtgccttctaaagctcttcttgctgttagtggt
cgaatgcgggaacttcagaacgaacatcacatgaagtcctttggtctccaggtttcagct
gctggatatgatcgtcagggtgtggcagatcatgctaataatctggctaccaaaatacga
aacaatctgaccaattcaatgaaggcaattggtgttgacatattgactggatttggcagt
gttctgggtccacaaaaggttaaatatgggaaggacaatattattactgcaaaagatata
atcattgccactggatctgtgccgtttgtccctaaaggaattgaagttgatggaaagact
gtgatcaccagtgaccatgctttgaaattagagtctgtccctgagtggattgcaattgta
ggaagtggttatattggtcttgagttcagtgatgtttacacagctcttggaagtgaggta
acttttatagaagcactggatcagctaatgcctggatttgatcctgagatcagtaagcta
gctcagagggttttgataaatccaagaaagattgactatcatactggagtctttgcaagc
aaaattactccggcaagggatgggaaaccagttctgattgagcttattgatgccaaaacc
aaggaacctaaggatactttggaggtagatgctgctcttattgctactgggagagctcca
ttcaccaatggacttggcttggaaaatgtcaatgttgtgacgcagagaggtttcatacca
gttgatgagcgaatgcgtgtgatcgatggaaaggggactctggttccgaacttgtactgc
attggtgatgccaatggtaaattgatgcttgcacatgcagccagtgcccaaggaatttct
gtggtcgagcaagtcagcggcagagatcatgtgcttaatcatcttagcatcccagctgct
tgctttactcatcctgaaatcagcatggtgggattaacagagcctcaagcaaaagaaaaa
ggcgagaaggaaggatttaaagttagtgttgtcaagacaagtttcaaggctaacacaaag
gccctagctgaaaatgaaggagaaggaatagctaagatgatataccgacctgacaatggt
gaaatcttaggagttcatatatttggactgcatgcagctgaccttatccatgaagcttct
aatgcgattgctctaggaacgcgtattcaggacataaaattggcagttcatgcacatcca
acactctctgaggtcctcgacgaactgttcaaagcagccaaggttgaaagtcatgctacg
acaaggacaggagatgcaaagataaagctaaacacgaaccaggaagatcgaaaaggaaga
agaagaggaggagatgatgagaaacaaccttccgtaagtaaagacttgaaagatatatct
acaaggccttcttctttctttgagaatatttctgttggagtcttgtctctgctttcactt
atatttgtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (22)   
   KEGG PATHWAY (15)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (94)   

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