KEGG   Arabidopsis thaliana (thale cress): AT3G18480
Entry
AT3G18480         CDS       T00041                                 
Symbol
CASP
Name
(RefSeq) CCAAT-displacement protein alternatively spliced product
  KO
K09313  homeobox protein cut-like
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ath03000]
    AT3G18480 (CASP)
Transcription factors [BR:ath03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain CUT
    AT3G18480 (CASP)
SSDB
Motif
Pfam: CASP_C CUX1_N Par-4_C Rab11-FIP3
Other DBs
NCBI-GeneID: 821377
NCBI-ProteinID: NP_566611
TAIR: AT3G18480
UniProt: Q9LS42 A0A5S9XDV8
Position
3:6336692..6341788
AA seq 689 aa
MEVSQDGSERDKTPPPSSSSSSSSPIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQ
KNRRKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEA
PDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQ
QMEEKIKEVVEIKQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQL
FELRAQSDEETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTDNKKSDN
IDSNSMLENSLTAKEKIISELNMEIHNVETALANERESHVAEIKKLNSLLNKKDTIIEEM
KKELQERPSAKLVDDLRKKVKILQAVGYNSIEAEDWDAATTGEEMSKMESLLLDKNRKME
HEVTQLKVQLSEKASLLEKAEAKGEELTAKVNEQQRLIQKLEDDILKGYGSKERKGALFD
EWEFSEAGVAEQSEPMDQKHVPSEQDQSSMLKVICSQRDRFRARLRETEEEIRRLKEKIG
FLTDELEKTKADNVKLYGKIRYVQDYNHDKVVSRGSKKYVEDLESGFSSDVESKYKKIYE
DDINPFAAFSKKEREQRIKDLGIRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCL
YRMSAYSYLSHGAEETLMTEATTNLPHGL
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggaggtttcgcaagatggatcggaaagagataaaactcctcctccttcctcttcttct
tcttcttcctctcccattcctgtcgtcaccaatttctggaaagaatttgatttggagaag
gagaaaagcctgcttgacgagcaagggcttagaatagctgaaaatcaagaaaacagccaa
aagaatcgccgaaagcttgcagagagcacacgagacttcaagaaagcttcgcctgagaac
aaacttagtatgtttaattccctcctcaagggatatcaagaagaagtagataatattacc
aagagggccaagtttggggagaatgctttcctaaatatctatcagaaactctatgaagca
cctgatccgtttcctgctcttgcttctattgctgagcaagatcgtaaattatctgaagtg
gaatctgaaaatcgaaagatgaaagttgaacttgaggagtttaggacagaagcgactcat
cttaaaaatcagcaggccacaataagaaggcttgaagaacggaaccgccagcttgagcaa
cagatggaagaaaaaatcaaagaagttgttgagatcaagcaacgaaatctggctgaggaa
aaccagaaaacgatggagcttttaaaggatagggagcaagctttgcaagatcagttaagg
caagcaaaagacagcgtctccactatgcaaaaattgcatgagttagcacagaaccaactt
tttgaactccgtgctcaatcagacgaagagaccgcggggaagcaatctgaagttagtcta
ttgatggatgaagtggagcgtgctcagacccgactccttactcttgagagggaaaaggga
catctgcgttctcagctgcaaacagctaatgaagatactgataacaagaaaagtgataat
attgattcgaatagtatgctggagaactcgttaactgcaaaagagaagattatttcggag
cttaatatggagattcacaatgttgagacagctttagctaatgagcgagaaagtcatgtt
gccgagataaagaaattgaattctttgctcaataaaaaggatactatcattgaagagatg
aagaaagagcttcaagaaagaccatcagcaaaattagttgatgatttgcgcaaaaaagtg
aaaattctgcaggctgtaggttacaattcaattgaggctgaagactgggatgctgctacc
actggtgaagagatgagcaaaatggagtcgcttcttcttgataaaaacagaaaaatggaa
catgaggtcactcagttaaaggttcaactttctgagaaagcttccttgcttgagaaggct
gaagccaagggagaagaactgacagctaaggttaatgaacaacaaagactgatacaaaag
ttggaggatgatattttgaagggttacggttcaaaagagcgaaaaggtgctctatttgat
gaatgggagttctcagaagcaggtgtggctgagcagtctgagcctatggatcagaaacat
gttccatcagagcaagatcaaagctcaatgctaaaagttatctgcagccaaagagatcgg
ttccgagcacgattacgggaaacagaagaggaaataaggcgattaaaagagaagataggt
tttctcacagacgaattggagaagaccaaagcagacaacgtcaaactctatgggaaaatc
cgttatgtccaagactataaccatgataaagttgtttcccgaggatcgaaaaagtatgtg
gaagatcttgaaagtggattcagctcggatgtcgaatcaaaatacaagaaaatttacgaa
gatgacatcaacccttttgcagcattctcgaaaaaggaaagagagcaacggatcaaagat
ttgggaatcagagatcggattacgctaagcagtgggcggttccttctaggaaacaaatac
gcaaggacatttgctttcttctacacaataggattgcacgtccttgtcttcacttgtctc
taccgtatgtctgcttacagttatctcagccatggagcagaggagactctaatgacagaa
gcaaccacaaaccttcctcacggtctttaa

  All links  
Gene (30)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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