KEGG   Arabidopsis thaliana (thale cress): AT3G25500
Entry
AT3G25500         CDS       T00041                                 
Symbol
AFH1
Name
(RefSeq) formin homology 1
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: FH2 YqgF Cadherin_C_2 stn_TNFRSF12A
Other DBs
NCBI-GeneID: 822136
NCBI-ProteinID: NP_189177
TAIR: AT3G25500
UniProt: Q9SE97 A0A178VBY1
Structure
Position
3:complement(9251093..9255083)
AA seq 1051 aa
MLFFLFFFYLLLSSSSDLVFADRRVLHEPFFPIDSPPPSPPSPPPLPKLPFSSTTPPSSS
DPNASPFFPLYPSSPPPPSPASFASFPANISSLIVPHATKSPPNSKKLLIVAISAVSSAA
LVALLIALLYWRRSKRNQDLNFSDDSKTYTTDSSRRVYPPPPATAPPTRRNAEARSKQRT
TTSSTNNNSSEFLYLGTMVNQRGIDEQSLSNNGSSSRKLESPDLQPLPPLMKRSFRLNPD
VGSIGEEDEEDEFYSPRGSQSGREPLNRVGLPGQNPRSVNNDTISCSSSSSGSPGRSTFI
SISPSMSPKRSEPKPPVISTPEPAELTDYRFVRSPSLSLASLSSGLKNSDEVGLNQIFRS
PTVTSLTTSPENNKKENSPLSSTSTSPERRPNDTPEAYLRSPSHSSASTSPYRCFQKSPE
VLPAFMSNLRQGLQSQLLSSPSNSHGGQGFLKQLDALRSRSPSSSSSSVCSSPEKASHKS
PVTSPKLSSRNSQSLSSSPDRDFSHSLDVSPRISNISPQILQSRVPPPPPPPPPLPLWGR
RSQVTTKADTISRPPSLTPPSHPFVIPSENLPVTSSPMETPETVCASEAAEETPKPKLKA
LHWDKVRASSDREMVWDHLRSSSFKLDEEMIETLFVAKSLNNKPNQSQTTPRCVLPSPNQ
ENRVLDPKKAQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKL
KAYNDDSPVKLGHAEKFLKAMLDIPFAFKRVDAMLYVANFESEVEYLKKSFETLEAACEE
LRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQE
IIRAEGTRLSGNNTQTDDIKCRKLGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQG
IAKINEAIQVQSTITEESNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFH
GNSAKEEAHPFRIFLVVRDFLGVVDRVCKEVGMINERTMVSSAHKFPVPVNPMMPQPLPG
LVGRRQSSSSSSSSSTSSSDEDEHNSISLVS
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgctcttcttcttattcttcttctacttactcttatcttcatcctccgatctagtcttc
gccgaccgtcgtgtactccacgaaccattcttccctatagattcaccaccaccgtcacca
ccatcaccaccaccacttcctaaactaccattctcttcaaccactcctccatcttcatca
gacccaaatgcttctcctttcttccctttatacccttcatctccaccaccaccttctcca
gcctccttcgcttcttttccggcgaatatctcatctctaatcgtccctcacgccactaaa
tccccacctaactccaaaaaactccttatcgtcgctatctccgccgtttcctccgctgct
ttagtcgctctacttatcgctttactctattggcgaagaagcaaacgtaaccaagatctt
aacttctccgatgatagcaaaacatacaccaccgacagtagccgccgtgtctaccctcct
cctccggcaacggcgcctccaacacgacgcaatgcggaggctagaagtaaacagaggacc
accacgagctccaccaataacaacagctctgagtttctttacttaggaacaatggtgaat
caaagaggaatcgatgaacaatctcttagtaataatggatcaagctcaagaaaacttgaa
tctccagatcttcaaccacttcctccattgatgaaacgaagtttccgtttaaatccagat
gttggttcaatcggagaagaagatgaagaagatgagttttactctccacgtggctcacaa
agcgggcgagaaccgttaaaccgggtcggacttccgggtcaaaatcctagatctgttaac
aatgacactatctcttgctcatcttcaagctctggttcaccaggaagatcaacatttatc
agtatctctccttcaatgagtcctaagagatctgaaccaaaaccgccggttatctccaca
ccagaaccggcggagttaaccgattatagatttgttcggtctccgtcactgtcgttagct
tctttatcgtcgggattgaaaaactccgatgaagtaggattgaatcaaatctttagatct
ccgacggttacatctctaacaacttcaccggagaataacaaaaaagagaactctccatta
tcatctacttcaacttcaccggaacgacgaccaaatgatacaccagaagcttacttgaga
tctccgtcgcattcttctgcttctacatcaccgtatagatgttttcagaaatctccggag
gtcttaccggcgtttatgagtaatctccggcaaggtttgcaatctcagttactatcttct
ccttctaactctcatggaggacaaggtttccttaagcagttagatgcattacgttctcgt
tcaccgtcgtcgtcttcttcttctgtttgttcttcaccggagaaagcttctcataagtca
ccagttacatctcctaagttatcttcccggaattcgcagtctctatcatcttctccggat
agagattttagtcatagcttagatgtatcaccacggatatcgaacatttcacctcaaatt
ttacagtctcgtgtgcctccgcctcctcctcctcccccaccgttgccgttgtggggacga
cggagtcaggtgactactaaagcggacacaatctcgagaccgccttctcttacaccgcct
tcacatccttttgtgatcccatctgaaaacttaccagtgacttcgtctcctatggagact
ccagagacggtttgtgcgagtgaggcggcggaggaaactccgaaaccgaagctaaaggcg
ttacattgggataaagttagagcaagttcggatcgtgagatggtttgggatcatcttcga
tcaagctctttcaaattagatgaggagatgattgagacgttgtttgtggcgaagtcgtta
aacaacaaaccaaatcagagtcagacaactccaagatgtgttctcccgagcccgaaccaa
gagaacagagtcctggacccgaagaaggctcagaatattgccatcttgcttcgtgcactt
aatgtcactatagaagaagtttgtgaggctcttcttgaaggcaatgctgatacactgggg
actgaacttcttgagagcttactgaagatggcaccgacaaaagaagaagagcgcaagttg
aaagcgtacaatgatgattcgcctgttaagcttggacatgctgagaaattccttaaggca
atgttggacatccctttcgcctttaaaagagttgatgcaatgctctatgtagccaacttt
gagtccgaggttgaatacttgaagaaatcttttgagactcttgaggctgcttgtgaagaa
ctgaggaacagtaggatgttcttaaagcttcttgaagcggttctaaagacaggaaaccgt
atgaacgttggaacaaaccgaggagatgcacatgcgttcaagcttgatacacttctcaag
ctagtcgatgtcaaaggcgctgatgggaaaacaactctcttgcatttcgttgtacaagag
ataatccgagcagaaggcacacgtctctcaggtaacaatacacaaacagatgacattaaa
tgccggaaactaggtctccaagttgtatcaagtctctgttctgagcttagtaacgtcaag
aaagctgctgcgatggactcagaagtactaagcagctacgtctccaagctttctcaaggc
attgccaagatcaacgaagcaatccaagtccaatcaacaatcacagaagaaagcaacagt
cagaggttttcggaatcgatgaaaacgtttctgaaaagagctgaggaagagatcatcaga
gtacaagctcaagagagcgtagcgttatcacttgtaaaagaaatcacagagtatttccat
ggaaactcggctaaagaagaagcgcatccgtttagaatattcttggtggttagagacttc
cttggagtagtagacagagtttgcaaagaagtagggatgataaacgaaagaacaatggtt
agttctgctcataagtttcctgttccagtgaatccaatgatgccacaacctcttcctgga
ctcgttggacgaagacaatcttcttcttcttcgtcgtcgtcttcaacctcttcgtctgat
gaagacgaacataactcaatctcattagtttcttaa

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Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (65)   

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