KEGG   Arabidopsis thaliana (thale cress): AT3G25660
Entry
AT3G25660         CDS       T00041                                 
Name
(RefSeq) Amidase family protein
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00970  Aminoacyl-tRNA biosynthesis
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AT3G25660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ath03029]
    AT3G25660
Enzymes [BR:ath01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     AT3G25660
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     AT3G25660
Mitochondrial biogenesis [BR:ath03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AT3G25660
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-GeneID: 822154
NCBI-ProteinID: NP_189194
TAIR: AT3G25660
UniProt: Q9LI77
Position
3:complement(9339342..9342223)
AA seq 537 aa
MLSTLQPPRSLSLLPLRRFQISKTIVSAASSKTIDTSVISPPQSQILTTRRSLLSGETTA
VEIAKSYLSRIRLTEPQLKCFLHVSENVLKDAQEIDQRIAKGEELGPLAGVLIGVKDNIC
TQGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTNMDEFGMGSTTEASAFQVTAN
PWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGL
MAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSKQDVPEFQSQFLSVDHFESKPL
NGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCILTEVSLPSFSLGLPAYYVIASSE
SSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGEVKMRILMGTYALSAGYYDAYYKR
AQQVRTLIRKDFKAALEQNDILISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLP
AMVLPCGLVEGGPSGLPVGLQMIGAAFDEEKLLKVGHIFEQTLKGSSFVPPLLANVA
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgttatcgacattgcaaccgccgcgttctctatcactcctccctctacgccggttccaa
atatctaaaaccatcgtctccgcagcttcttcgaagaccatcgacacttccgttatctct
ccaccacaatctcaaattctcaccactcgtcgttcactcctctccggcgaaaccacagct
gtcgaaatcgcaaaatcttacctttctcgtatccgtctcactgaacctcagctcaaatgc
ttccttcacgtatcggagaatgttctcaaagatgctcaagagattgatcaacgaatcgct
aaaggtgaggaattgggtcctctcgccggagttttgatcggcgttaaggataatatatgt
actcaaggtatgccttctactgctgcttcgagaatcttagagcattatcgtccaccgttc
gatgcgacggcggttaagaagattaaagagttgggtgggattgttgttggtaagactaat
atggatgagtttggaatgggaagtaccactgaagcttctgcttttcaggtaactgcgaat
ccgtgggatttgagtcgtgtaccgggaggttcatcgggaggatcagcagcagctgttgca
gcaaggcagtgtatggtgtcacttggtagtgatactggtggaagtgtgagacagccagct
tcgttttgtggtgttgtaggtcttaagccgacttatgggcgtgtttctaggtttgggctt
atggcttatgcgtcttcgttggatgtgattgggtgttttgggtctacggttgctgatgct
gggatgcttcttcatgctatttcggggtatgataggtttgactccacgagtagcaaacaa
gatgtgcctgagttccagtctcagtttctatctgtggatcattttgagtctaaaccattg
aatggagtgaaagttggtataattcgcgagacacttgaagacggtgttgattctggagtg
agatctgctactcaggaagctgcgtctcacttagaagcattgggttgtatattgacagag
gtctcccttccttcattctctcttggactaccagcttactacgttattgcctcatcggag
tcatcttcgaatttatcacgttatgatggtgtcagatatggtaatcaagttatggctgaa
gaactcaataagctgtatgaatgttcccgtggagaaggatttggaggagaggtgaaaatg
agaattttaatggggacatatgcactttctgcgggttactacgatgcttactacaagcga
gctcaacaggtgaggacactaattcgaaaagacttcaaagcagcgttagaacagaacgat
atccttatttctccggcagctccatctgctgcatacaagattggtgaaaagaaagatgat
ccactggcaatgtatgctggagacattatgacggtcaatgtgaatcttgccggacttcct
gcaatggtattaccttgtggattagtcgaaggtggtccctcgggtcttcctgttggtctt
caaatgatcggagcagcgtttgatgaggagaaattgctgaaagtgggtcacatatttgag
cagactcttaaaggatcgagctttgttcctccattgttagccaatgtagcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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