KEGG   Arabidopsis thaliana (thale cress): AT3G27100
Entry
AT3G27100         CDS       T00041                                 
Name
(RefSeq) transcription/mRNA export factor
  KO
K11368  enhancer of yellow 2 transcription factor
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT3G27100
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT3G27100
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G27100
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     AT3G27100
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     AT3G27100
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     AT3G27100
SSDB
Motif
Pfam: EnY2
Other DBs
NCBI-GeneID: 822329
NCBI-ProteinID: NP_189346
TAIR: AT3G27100
UniProt: Q6NQ54
Position
3:complement(9994481..9996115)
AA seq 115 aa
MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE
MRIACREHVKKKGRKDVTVDELIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL
NT seq 348 nt   +upstreamnt  +downstreamnt
atgaaacattcggtgaatcggcctccgacaccagatgaagacgatgtggcggatggtttc
gagaaagacaaggtcacgcttcgagaaatcatcaacgtcaagttggtggagagtggagag
aaggagaatctaatggagcttgtgagagatagattggtggagtgtggttggaaagatgag
atgagaattgcttgcagggagcatgtaaagaagaaagggagaaaagatgttacagtcgat
gaactgatccgagtgatcactcctaaaggcagagcttcagtaccagattctgtgaaggca
gagctgttgaacagaattcaaaacttcattgtatcagctgctctttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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