KEGG   Arabidopsis thaliana (thale cress): AT3G47520
Entry
AT3G47520         CDS       T00041                                 
Symbol
MDH
Name
(RefSeq) malate dehydrogenase
  KO
K00026  malate dehydrogenase [EC:1.1.1.37]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00020  Citrate cycle (TCA cycle)
ath00270  Cysteine and methionine metabolism
ath00620  Pyruvate metabolism
ath00630  Glyoxylate and dicarboxylate metabolism
ath00710  Carbon fixation by Calvin cycle
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
ath01200  Carbon metabolism
Module
ath_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ath_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ath_M00012  Glyoxylate cycle
ath_M00168  CAM (Crassulacean acid metabolism), dark
ath_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    AT3G47520 (MDH)
   00620 Pyruvate metabolism
    AT3G47520 (MDH)
   00630 Glyoxylate and dicarboxylate metabolism
    AT3G47520 (MDH)
  09102 Energy metabolism
   00710 Carbon fixation by Calvin cycle
    AT3G47520 (MDH)
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    AT3G47520 (MDH)
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.37  malate dehydrogenase
     AT3G47520 (MDH)
SSDB
Motif
Pfam: Ldh_1_N Ldh_1_C 3Beta_HSD Epimerase Semialdhyde_dh PBP_dimer
Other DBs
NCBI-GeneID: 823906
NCBI-ProteinID: NP_190336
TAIR: AT3G47520
UniProt: Q9SN86 A0A654FEK4
Structure
Position
3:17512816..17515155
AA seq 403 aa
MATATSASLFSTVSSSYSKASSIPHSRLQSVKFNSVPSFTGLKSTSLISGSDSSSLAKTL
RGSVTKAQTSDKKPYGFKINASYKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVK
GVAADLSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVK
TLVEAVAENCPNAFIHIISNPVNSTVPIAAEVLKKKGVYDPKKLFGVTTLDVVRANTFVS
QKKNLKLIDVDVPVIGGHAGITILPLLSKTKPSVNFTDEEIQELTVRIQNAGTEVVDAKA
GAGSATLSMAYAAARFVESSLRALDGDGDVYECSFVESTLTDLPFFASRVKIGKNGLEAV
IESDLQGLTEYEQKALEALKVELKASIDKGVAFANKPAAAAAN
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcaacagcaacatcagcttctctgttttcaactgtttcttcatcttactccaaagct
agctccataccacattcaagactccaatctgtgaaattcaactcagtccctagcttcacc
ggtctcaaatcaacctctctcatctccggatctgattcctcttccttagccaagactcta
cgcggttccgtaacgaaagcacaaacatctgacaagaagccttacggattcaaaatcaac
gcttcatacaaagtagctgttcttggtgctgctggtggtataggtcagcctttatcactt
ctcatcaagatgtctccgttagtctctacgcttcatctttacgatatcgccaatgttaaa
ggagttgctgctgatctaagtcattgtaacactccttctcaagttcgtgatttcactggt
ccttctgagttagctgattgtttgaaagatgttaacgttgttgtcatccctgctggtgtg
ccgaggaaacccggtatgactcgtgacgatcttttcaacatcaatgccaatattgtcaag
actcttgttgaagctgttgctgagaattgccctaatgctttcattcatattattagtaac
ccggttaactctacggtacctattgctgctgaagtgttgaagaagaaaggtgtttatgat
cctaagaagctgtttggtgtcactactttggatgttgtgagggctaacacttttgtttct
cagaagaagaatcttaagcttattgatgttgatgttccggttattggtggacatgctgga
atcaccattttgcctctcctctcgaagacaaaaccgtctgttaactttactgatgaagag
atccaagagctcactgttaggattcagaacgctggtactgaggttgttgatgctaaggca
ggtgcaggttcagctactttgtcaatggcttatgctgctgctagatttgtagagtcatct
cttcgtgctcttgatggagacggagatgtctacgagtgctcgtttgtggagtcgactctg
actgatcttcctttctttgcatcacgggttaagatagggaagaacggtcttgaagctgtg
attgagtcagaccttcagggattgactgagtatgagcagaaagcactagaagctcttaag
gtagaattgaaagctagcattgacaagggtgtcgcatttgcaaacaaaccagctgctgca
gcagctaactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (8)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

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