KEGG   Arabidopsis thaliana (thale cress): AT3G48110
Entry
AT3G48110         CDS       T00041                                 
Symbol
EDD1
Name
(RefSeq) glycine-tRNA ligase
  KO
K14164  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AT3G48110 (EDD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT3G48110 (EDD1)
Enzymes [BR:ath01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     AT3G48110 (EDD1)
Transfer RNA biogenesis [BR:ath03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    AT3G48110 (EDD1)
SSDB
Motif
Pfam: tRNA_synt_2f tRNA-synt_2e DALR_1
Other DBs
NCBI-GeneID: 823966
NCBI-ProteinID: NP_190394
TAIR: AT3G48110
UniProt: Q8L785
Position
3:17762970..17771146
AA seq 1067 aa
MAILHFSLPLIVSFLRPHASPRFFLLPRSLSQSPFLSRRRFHRTSAVSSAAVHHQSYRNP
DDDVTRAVSVPTFQQAIQRLQEYWASVGCAVMQPSNTEVGAGTMNPCTFLRVLGPEPWNV
AYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQQLFINSLSALGIDVTAHDIRF
VEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQE
VDHFKKILYADGITYGELFLENEKEMSSYYLEHASVDRLQKHFDYFDEEARSLLALGLPI
PAYDQLLKTSHAFNILDARGFIGVTERARYFGRMRSLARQCAQLWLATRESLGHPLGVAS
EPVPPVCHRAALEKVAEKVSEDPRSFIIEIGTEEMPPQDVINASEQLRVLVLELLENQRL
RHGAVKAFGTPRRLVVLVDAMSSKQLEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGV
PLEKLYRKVSGKTEYVHARVTEPARLALEVLSEDLPGILAKISFPKSMRWNSSVMFSRPI
RWVMALHGDLVVPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEER
KKIILEKSNALAKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQ
KHQKYFSIIDESGQLLPYFIAVANGAINEDVVKKGNEAVLRARYEDAKFFYEVDTRKRFS
EFRDQLQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVEDAASLAMSDLATA
VVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDAGMVLAIGDRLDS
LVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAASVQPTKVEANTV
EDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEKLSKGEMFPKIVE
AYSRPTRIVRGKDVGVGVEVDENAFETPQERTLWSTYTSIKDRIHTGIEIEDFTEISMQL
VEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLSFLPGF
NT seq 3204 nt   +upstreamnt  +downstreamnt
atggccatcctccatttctctcttcctcttatcgtctctttccttcgtcctcacgcctct
cctcgcttcttcctcctccctcgctctctttctcagtcccctttcctctcccgccgccgt
tttcaccgtacctccgccgtttcctccgccgctgttcatcaccaatcctatcgtaatccc
gacgatgatgttacccgcgcggtgtctgttcctacattccaacaagcgattcaacgcctc
caggaatattgggcttccgttggatgtgccgttatgcaaccaagtaacactgaggtcgga
gctggcaccatgaatccttgtacctttttgagggttcttggtcctgaaccatggaatgtt
gcttatgttgagccaagcatacgtcctgacgactctcgctatggagagaatcccaatagg
cttcaaagacacactcaatttcaagtcatattgaaacctgaccctggaaactctcaacag
ctctttatcaacagtctttctgctctaggtattgatgtgactgcacacgatatacggttt
gtagaagacaactgggagagcccggtgcttggtgcttgggggttgggctgggagatttgg
atggatggtatggaaatcacacaatttacttacttccagcaggctggaagtcttccgttg
tctccagtatctgttgaaataacttatgggcttgagcgcatcatcatgttacttcaggaa
gttgaccatttcaaaaagatcttatatgctgatggaatcacctatggggagcttttcttg
gaaaatgagaaggaaatgagctcatattatttagagcatgctagtgtggatcgccttcaa
aagcatttcgattattttgatgaagaagcacgttccttgcttgccttaggacttccaatc
cctgcgtatgaccagcttctgaagacatctcacgcttttaacattttagacgctagaggt
ttcattggcgtaactgaacgtgctcgttatttcggtcgaatgcgtagcttggctcgccaa
tgtgcccaactgtggttagcgacacgtgagtctcttggacatcctcttggtgttgcctcc
gaaccagttcctcccgtttgtcacagagctgctctggaaaaagtggctgaaaaggtttct
gaagatccaagatcgtttattattgagatagggactgaagagatgccacctcaagatgtt
atcaatgctagtgaacaactcagggtcttagtgctagaattactagagaaccaaagattg
cggcatggtgctgtgaaagcatttggcacacctcgcaggctagtggttttagttgatgct
atgtcctcgaagcagctggaagaggaggttgaagttcgaggaccccctgcttctaaagct
tttgatgatgaaggaaatcctacaaaggctgctgagggttttagccgcagatatggcgtt
ccattggaaaaattgtacagaaaagtttctgggaagacagaatatgtacatgcacgagtt
acagagccagctcgacttgctttggaggttctgtcagaagatttacctggtatactggct
aaaatatcgttcccaaagtcaatgcggtggaactcttcagtaatgtttagcaggccgatt
cgctgggttatggccttacatggtgatctggttgtgccattctcctttgctggcatctca
agtggaaatgtatcttgtggacttcgcaatactgcttcagcatcactgttggtacagaat
gcagaatcctatgaagatactatgaggaattctggaatcaatattgagattgaggaaagg
aagaaaatcattcttgagaagtcaaatgcactagcaaagagtgtgagtgggcgccttgtt
gttccgcagaacttacttaatgaagttgcaaatctcgtcgaagctcctgtgcccttaatt
ggaaagttcaaggaatcattcttagaacttccagaggagctattaactattgttatgcag
aagcaccagaagtatttttccattattgatgagagtggacagctattgccttactttatt
gctgttgccaatggtgcaataaatgaggatgtggtgaagaaaggaaatgaagcagttctc
agggcacgttatgaagatgcaaagttcttctatgaggtggacacaaggaaaagattttct
gaattccgagatcagctacagggaattcttttccatgaaaagctggggacgatgctggat
aagatgaaccgcctcaaaaagatggtatctaaactttgtttggccctcaaaattgatgaa
gatctgcttccggttgtagaggatgctgcctcacttgctatgtcagatcttgcaactgct
gtagttacagaatttactgcgctgtcaggaataatggctcgtcattatgctctcagagat
ggctattcagagcagatagcagaagctttgctggaaattacacttcctagattttctgga
gacgtcatcccaaaaacagatgcaggaatggttttggcaataggtgatagattggatagc
cttgttggtttatttgctgctggttgccagccaagttcaacaaatgacccttttggcctt
agaagaatatcatatggcttagttcagattttggtcgagaaggataaaaatgtcaacttc
aaacgtgttctagaacttgcagccagtgtacaaccgacgaaggttgaggcaaacactgta
gaagatgtgtatcaatttgttactcgaagactggaacagctattggttgacaacggagta
agccctgaagtagttaggtctgtcctagcagagcgtggaaacaatccttgtctggcagca
cggactgcatacaagacggaaaagctaagcaaaggtgagatgtttccgaagatagtggaa
gcatattctcgtcccacacgcattgtccgtgggaaagatgttggtgttggagttgaggtg
gatgagaatgcatttgagactccccaagagagaacgttgtggagtacttacacctctatc
aaagatcgaattcacactggcattgaaatcgaggacttcaccgagatatccatgcaattg
gtggagccactcgaggatttcttcaacaatgtatttgtaatggtggaggaagaaagagtg
aggaagaacagactcgctctgcttaataacattgccaatcttcccaaaggagtcattgac
ctctcatttttgcccggattttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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