KEGG   Arabidopsis thaliana (thale cress): AT3G48930Help
Entry
AT3G48930         CDS       T00041                                 

Gene name
EMB1080
Definition
(RefSeq) Nucleic acid-binding, OB-fold-like protein
  KO
K02949  small subunit ribosomal protein S11e
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03010  Ribosome
Module
ath_M00177  Ribosome, eukaryotes
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    AT3G48930 (EMB1080)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ath03011]
    AT3G48930 (EMB1080)
Ribosome [BR:ath03011]
 Ribosomal Proteins
  Eukaryotes
   Small subunit
    AT3G48930 (EMB1080)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Ribosomal_S17_N Ribosomal_S17
Motif
Other DBs
NCBI-GeneID: 824054
NCBI-ProteinID: NP_190462
MIPS: AT3G48930.1
TAIR: AT3G48930
Araport: AT3G48930
UniProt: P16181 A0A178VH97
Position
3
AA seq 160 aa AA seqDB search
MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP
FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM
NT seq 483 nt NT seq  +upstreamnt  +downstreamnt
atggcggaacagactgagaaagcttttcttaagcagcctaaggtcttccttagctcgaag
aaatctggaaagggaaagagacctggaaaaggtggaaaccgtttctggaagaacattggt
ttgggcttcaagactcctcgtgaagccattgatggagcttacgttgacaagaaatgcccc
ttcactggaactgtttccattagaggtcgtatcttagctggtacttgccacagtgcgaaa
atgcagaggaccattatcgtgcgaagggattaccttcactttgtgaagaagtatcagagg
tatgagaagaggcattcaaacattccggctcatgtctcaccatgcttccgtgttaaggaa
ggagaccatatcatcattggccaatgcaggccattgtcgaagacagtgaggttcaatgtg
ttgaaggtgataccagctgggtcttcttcttcatttggaaagaaggcattcactggaatg
taa

DBGET integrated database retrieval system