KEGG T00041: AT3G50590

Arabidopsis thaliana (thale cress): AT3G50590

Entry

AT3G50590         CDS       T00041

Name

(RefSeq) Transducin/WD40 repeat-like superfamily protein

Organism

ath Arabidopsis thaliana (thale cress)

SSDB

Motif

Pfam:

Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_EML_2 WDR55 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_IFT140_1st B-prop_COPA_B_2nd TPR_2 Beta-prop_WDR5 Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd TPR_COPA_B Beta-prop_Aladin DZR_2

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

TAIR:

UniProt:

Position

3:18770872..18779502

AA seq 1606 aa
MEWATVQHLDLRHVGRGVSKPLQPHTAAFHPSQAVIAVAVGSHIMEFDALTGCKIASIDI
GSPAVRMLYSPTSSNAVVAILEDCTIRSCDFETEQTCVLHSPEKRSEHISSDTEVHLAVT
PLQPVVFFGFPKRMSVTVVGTVEGGRAPTKIKTDLKKPIVNIACHPRLPVLYVAYAEGLI
RAYNIHTYAVHYTLQLDNTIKLIGASSFAFHPTLEWIFVGDRRGTLLAWDVSTERPNMIG
ITQVGSQPITSISWLPMLRVLVTVSKDGSLQVWKTRVIINPNRPSTQTNFFEPAAMESID
IPKILSQQGGEAVYPLPRIKTLEVHPKLNLAALIFANMVGNENTQNRAAQTREGRKQLFA
VLQSARGSSASVLKEKLSSMGSSGILAEHQLQALLQEHKGQSQLTISDIARKAFLYSHFM
EGHAKTAPISRLPLITVVDTKDQLKDIPVCQPFHLELNFFNKPNRVLHYPVRSFYIEGLN
LMAHNLCSGTDNIYKKLYTSIPGNVEYHSKHIVYSRKRHLFLVVFEFSGATNEVVLYWEN
TGSQLPNSKGSTAKGCDAAFIGPNDDQFAILDEDKTGLSMYILPKLTTMEENEKNLLSEE
NQKKEADPSGIQGPQQFMFETEVDRVFSTPIESTLMFACNGTQIGLAKLFQGYRLSASDG
HYISTQGEGRKSIKLKKHEIALQVQWQETPRGYVAGILTTQRVLMVSADFDILASSSTKY
DRGLPSFRSLLWVGPALLFSTTTAVCLLGWDGKVRTILSISTPYAALVGALNDRLLLAHP
TDISPKQKKGIEIKSCLVGLLEPLLIGFSTMQQTFEQKVDLSEILYQITTRFDSLRITPR
SLDILARSAPVCGDLAVSLAQAGPQFNQVLRCAYAIKALRFSTALSVLKDEFLRSRDYPK
CPPTSLLFQRFRQLGYACIKYGQFDSAKETFEVIGDYESMLDLFICHLNPSAMRRLAQKL
EEESGDPELRRYCERILRVRSTGWTQGIFANFAAESMVPKGPEWGGGNWEIKTPTDMKSI
PKWELAGEVMPYMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLVSKPGGLSLLG
KPVSDKPLALPAGESSSMMGLESLGKQNVADEQAKAAEEFKKTMYGATGDGSSSDEEGVT
KPKKLQIRIREKPTSTTVDVNKLKEAAKTFKLGDGLGLTMSRTKSINAGSQDLGQMLSQP
SSSTVATTTAPSSASAPVDPFAMSSWTQQPQPVSQPAPPGVAAPIPEDFFQNTIPSVEVA
KTLPPPGTYLSKMDQAARAAIAAQGGPNQANNTPLPDIGLPDGGVPQQYPQQTSQQPGAP
FQTVGLPDGGVRQQYPGQNQVPSQVPVSTQPLDLSVLGVPNTGDSGKPPGQPQSPPASVR
PGQVPRGAAAPVCFKTGLAHLEQNQLPDALSCFDEAFLALAKDQSRGADIKAQATICAQY
KIAVTLLREILRLQRVQGASALSAKDEMARLSRHLASLPLLAKHRINCIRTAIKRNMEVQ
NYGYSKQMLELLLSKAPASKQEELRGLVDLCVQRGTSNKSIDPLEDPSQLCSATLSRLST
IGYDVCDLCGAKFAALSSPGCIICGMGSIKRSDALAGPAPVSTPFG

NT seq 4821 nt +upstreamnt +downstreamnt
atggagtgggcaacggtgcagcatctggatctgcgtcatgtaggtcgcggtgtgagcaag
ccactacaacctcatacggcggcgtttcatccttctcaagccgttatcgctgttgccgtt
ggctctcacatcatggaatttgatgcattaacgggatgtaagatcgcgtctattgatatt
ggatctccagctgttagaatgttgtatagtcctactagcagcaatgctgttgttgccatt
cttgaggattgtacaattaggtcttgtgattttgaaacggagcagacttgtgtattgcac
tcaccggagaagaggagtgagcacatttcctcagatactgaagttcatcttgctgtgacg
ccacttcaacctgttgtgttctttggattcccaaaacgaatgagtgtcacagttgttgga
actgttgaaggtggaagagctccaaccaaaattaagacagatttgaagaaaccaattgtg
aacattgcttgccatcctcgactacctgtcctgtatgtagcatatgcagaggggttgata
cgagcttataacattcatacttatgctgttcattatacactacagcttgataatactatt
aaacttatcggcgcaagttcgtttgcttttcacccaacactagaatggatttttgttgga
gataggaggggtacacttttagcgtgggatgtttcaactgaaagacctaatatgattgga
ataacgcaagtgggttcgcaacccatcacttcaatttcttggcttcctatgttgcgtgta
cttgtcactgtgtccaaggatggatctcttcaagtgtggaagacacgagtaataattaat
cccaataggccttcgacacaaacaaacttctttgagcctgctgctatggaatcaatagac
attcctaaaattctctcccaacagggtggcgaagctgtttaccctttaccacgaatcaaa
actttagaagttcacccaaagctgaacttagcagctttgatttttgcaaacatggtgggt
aatgagaacactcaaaatcgagcagctcagactagagaaggaaggaagcagctctttgca
gttttgcaaagtgctaggggatcttcagcttctgttctaaaggaaaagctttcgtctatg
ggttcctctggaattttagccgagcatcaacttcaagctctgctacaggagcacaagggc
cagagtcagctaacaatttcagatatcgcacggaaggcgttcttgtatagtcattttatg
gagggtcatgccaaaactgctccaatatcaaggttaccccttattacggtcgtggataca
aaggatcaacttaaagacattcctgtttgccagccatttcatttggagctgaatttcttc
aataagccaaatagagttcttcattatcctgtgaggtccttttatatcgagggccttaac
ctcatggctcacaatctctgttctggaacagacaacatctacaagaagctgtacacatcg
atccccggaaatgttgaatatcattcgaaacacattgtttacagtcgtaaaaggcacctc
tttctggttgtctttgagttcagtggtgctacaaatgaagttgtgctttactgggaaaat
acaggttcccagctgcctaatagcaaaggaagcactgctaaaggttgtgatgctgccttt
atcggcccaaatgacgatcaatttgcaattcttgacgaggataagacaggactgtctatg
tatatcctcccaaaacttaccacaatggaagagaatgagaagaatttgttatctgaagaa
aaccaaaagaaagaggcggatccttctggaattcagggtccacaacaattcatgtttgag
acagaagtcgatcgtgttttttccacaccgatagagtccactctgatgtttgcttgtaat
ggaacccaaattgggctggcaaagttgtttcaaggctaccgtctctcagcttcagatggt
cattatatttcaacacaaggtgagggacgaaagtcaatcaagttgaagaaacatgaaata
gctcttcaggttcaatggcaagaaacaccccggggatatgtcgcagggatattaacaacc
caaagggtgctgatggtgtctgcggattttgatatattggcaagcagttcaacgaaatat
gatagaggcttaccatcatttagatctcttctatgggttgggcctgccttactcttttct
acaacaactgctgtatgtttacttggctgggatgggaaagtgaggactattctttccata
agtacaccatacgcagccctagttggtgccttgaatgaccgcctattgcttgctcatccc
actgatataagtccgaagcagaaaaaggggatcgaaatcaagagctgccttgttgggcta
cttgaaccgcttttaattggattttctacaatgcaacaaacatttgaacagaaagtagac
ctttctgaaatattgtatcaaataacaacaaggtttgatagcttgcgaattactccaaga
tctcttgatattcttgctagaagcgctccagtatgtggagatcttgctgtatcactagct
caagcaggccctcaattcaaccaggtattacgttgtgcatatgcgataaaggctcttcgg
ttctccacggcattgtcagttttaaaggacgagttcttgcgttctagagactatccaaaa
tgtcctccaacttctcttttgttccagaggttccggcagcttggatatgcctgtatcaaa
tatggtcaattcgatagcgcaaaggaaacttttgaagtaataggcgactatgagagcatg
ctagatctttttatatgccacctcaaccctagtgctatgcgtcgtcttgcccagaaattg
gaagaagaaagtggagatcccgagttgagacgatattgtgaaaggattttacgagtacgg
tctacaggatggacccagggaatttttgctaattttgcagctgagagtatggttccaaaa
ggaccagaatggggtggtggcaactgggaaatcaagactccaaccgacatgaagagcata
cctaagtgggagcttgctggggaagtaatgccatacatgaagaatgaagatggaaccatc
ccctcaatagtagctgatcatattggtgtttacttgggctgtgtcaaaggcagagttaat
gtggtggaaattaaagaagacagcttagtttctaaacctggagggcttagtttgttgggt
aaacctgtatcggataaacctctggcacttcctgctggtgaatcaagttcgatgatgggt
ctggaatcccttggaaaacaaaacgtagctgatgaacaggcaaaggctgctgaggaattc
aagaaaacaatgtatggtgctactggtgatggcagcagcagtgacgaggaaggtgtaaca
aaacctaagaagctgcagattagaatacgagaaaagccaacatctaccaccgtggacgtc
aataagcttaaagaagctgctaaaacgtttaaactcggagatggtctaggcttaacaatg
agtagaacaaaatcaattaatgctggatctcaggatttgggtcagatgttaagccagcct
tcttcctcaacagttgcaactacaactgctccaagttctgcatctgctcctgttgatcct
tttgcaatgagctcatggacacagcaacctcaaccagtttctcaaccagctccacctggt
gtagccgcgccgataccggaagactttttccaaaacacaatcccatctgttgaggttgcc
aagacattgcctcctcctggcacttatctttcgaaaatggaccaagctgctcgagctgca
atagctgcacagggtggtccaaatcaagcaaataatactcctctgcctgatattggtctt
cccgatggtggtgttcctcaacagtatcctcaacaaacaagtcaacaacctggtgcgcca
tttcagactgttggacttcctgacggcggtgttcgtcaacagtatcctggtcagaaccag
gtgccatctcaggttcccgtttctacacagcctcttgatcttagcgttcttggagttcca
aataccggcgattctggtaagcctcctggacaacctcaatcgcctcctgcatcagttcgt
cctggacaggttccacgtggagctgcagctccggtttgtttcaagactggacttgcccat
cttgaacaaaaccagcttccagatgcactgtcttgctttgacgaagcattcttggctctg
gctaaggatcaatcgcgtggtgcagatatcaaagctcaagccacaatctgtgctcagtac
aagatagctgtaactctccttcgggaaatcttgaggctacaaagagtccaaggtgcaagt
gcattaagcgcaaaggacgaaatggcaagactttcaaggcatctagcttcactgccacta
ctagccaagcaccgtataaactgcatacgtactgcaatcaaaagaaacatggaagttcaa
aactatggctactcaaagcagatgctggaacttcttttatcaaaggcaccagcgagtaag
caagaggaattaagaggactagtcgatctctgtgtccagagaggcacatcgaacaaatcc
attgacccgcttgaagatccttctcagttatgctcagctacgctcagcagattatcgact
attggatacgatgtttgtgatctctgtggtgctaagtttgctgctctttcgtcgcccggt
tgtatcatatgcggtatgggaagcatcaaacgctctgatgcactcgctggacctgcacct
gtatccacaccgtttggctaa

All links

Gene (25)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (19)   
   Pfam (19)   
All databases (49)   

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