KEGG   Arabidopsis thaliana (thale cress): AT3G53120
Entry
AT3G53120         CDS       T00041                                 
Symbol
VPS37-1
Name
(RefSeq) Modifier of rudimentary (Mod(r)) protein
  KO
K12185  ESCRT-I complex subunit VPS37
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT3G53120 (VPS37-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT3G53120 (VPS37-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT3G53120 (VPS37-1)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    AT3G53120 (VPS37-1)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT3G53120 (VPS37-1)
  Exosomal proteins of colorectal cancer cells
   AT3G53120 (VPS37-1)
SSDB
Motif
Pfam: Mod_r APG6_N GlutR_dimer Orthopox_B11R
Other DBs
NCBI-GeneID: 824478
NCBI-ProteinID: NP_190880
TAIR: AT3G53120
UniProt: Q9SCP9 A0A178V7F7
Position
3:complement(19690571..19692578)
AA seq 217 aa
MFNFWGSKDQQQGQSRPQEASSQSPWYSPSLVSSPSSSRPQSSGQISAQVSPGEAAGIIV
FLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQIME
LRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEK
FLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTSNI
NT seq 654 nt   +upstreamnt  +downstreamnt
atgttcaatttctggggatcaaaagaccaacaacaagggcaatctcgtcctcaggaagct
tcttcacagtcgccatggtactcgccttctttagttagctcgccaagctcatcccggcct
caaagttcaggtcagatttcagcacaagtatcaccgggtgaagcagctggcattatcgtc
ttcttgaaagacaaaagcgtggatgaactcaggaagcttctctctgacaaagatgcgtat
cagcaatttctgctctctcttgaccaggtcaaagtccagaataatatcaaagatgagctc
cgtagagaaacattgcagctagctagagacaacttggagaaggagccacagataatggag
ctcagaaaccaatgcagaattatccgtacaactgagctcgcaactgcgcaagaaaagctt
aatgagcttgagaggcaaaaagaagagatcctcaaattctactcccctggttctcttctt
cataaacttcaagaggctatgaatcaggtggatgaagaatccgaagccctgcaagaaaag
ttcctagagaaggagattgatacagcagcatttgtgcagaaatacaagaagcttcgtact
acctatcatcgacgagcattgatccatcttgccgctaaaacgtcaaacatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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