KEGG   Arabidopsis thaliana (thale cress): AT3G54890
Entry
AT3G54890         CDS       T00041                                 
Symbol
LHCA1
Name
(RefSeq) chlorophyll a-b binding protein 6
  KO
K08907  light-harvesting complex I chlorophyll a/b binding protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00196  Photosynthesis - antenna proteins
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09102 Energy metabolism
   00196 Photosynthesis - antenna proteins
    AT3G54890 (LHCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:ath00194]
    AT3G54890 (LHCA1)
Photosynthesis proteins [BR:ath00194]
 Antenna proteins
  Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
   LHCI
    AT3G54890 (LHCA1)
SSDB
Motif
Pfam: Chloroa_b-bind
Other DBs
NCBI-GeneID: 824654
NCBI-ProteinID: NP_191049
TAIR: AT3G54890
UniProt: Q01667 A0A178VBT7
Structure
Position
3:complement(20339504..20341176)
AA seq 241 aa
MASNSLMSCGIAAVYPSLLSSSKSKFVSAGVPLPNAGNVGRIRMAAHWMPGEPRPAYLDG
SAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAA
LPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKD
PKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPF
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcgtcgaactcgcttatgagctgtggcatagccgccgtgtacccttcgcttctctct
tcttccaagtctaaattcgtatccgccggagttccactcccaaacgccgggaatgttggt
cgtatcagaatggctgctcactggatgcctggcgagccacgaccagcttaccttgacggt
tctgctcctggtgactttgggtttgacccacttggacttggagaagttccagcgaacctt
gagagatacaaagagtcagagctcatccactgtagatgggctatgctcgctgttcctggg
attttggtaccagaagcattaggatatggaaactgggttaaggctcaggaatgggcagca
ctaccagggggtcaagccacttacttgggaaacccagtcccgtggggtactttgcccaca
atcttggccattgagttcttagccattgcatttgttgagcaccagagaagtatggagaaa
gaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatactcgaaggac
cccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggcttgcgctgttg
gcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggaccattggagaac
ttggcaactcacttggcggatccatggcacaacaacattggcgatattgttatccctttc
aactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (4)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
3D Structure (12)   
   PDB (12)   
Protein domain (1)   
   Pfam (1)   
All databases (49)   

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