KEGG   Arabidopsis thaliana (thale cress): AT4G10710
Entry
AT4G10710         CDS       T00041                                 
Symbol
SPT16
Name
(RefSeq) global transcription factor C
  KO
K25639  FACT complex subunit SPT16
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT4G10710 (SPT16)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     AT4G10710 (SPT16)
SSDB
Motif
Pfam: SPT16 FACT-Spt16_Nlob Peptidase_M24 Rttp106-like_middle SPT16_C DUF3956
Other DBs
NCBI-GeneID: 826665
NCBI-ProteinID: NP_001329034
TAIR: AT4G10710
UniProt: O82491 A0A178UXH6
Position
4:complement(6601903..6606357)
AA seq 1074 aa
MADSRNGNARAPPSGVPPKAGNTYSIDVKNFISRARALYEHWKKHSADLWGSADALAIAT
PPASDDLRYLKSSALNIWLLGYEFPDTIMVFTKKQIHFLCSRNKASLLEVVKKPAHDELK
LDVIMHVKPKGDDGTGLMDAIFRAIRDLSRGDGNDSQVVGHIAREAPEGKLLETWTERLK
NANFQFVDITGGLSDLFAVKDDTEVMSVKKAAYLAYSVMKNVVVPNLESAIDEEKDVTHS
ALMDLTEKAILEPTKASVKLKPENVDICYPPIFQSGGKFDLKPSAASNDELLTYDPASII
ICAVGARYNSYCSNVARTYLIDATSLQSKAYEVLLKAHEAAIDALRSGRKINTVYQAALS
VVEKNAPEFVDKLTKSAGTGIGLEFRESGLNINAKNDKVLRPKMAFNVSLGFQNLECESE
SRSKNKKFSLLLADTVLVTDQKPELLTKCSKSVKDVAYSFKEDEEEEKPRKKARTSGSEN
YITKTALRSDDHVVSKEELRKQHQAELARQKNEETARRLAGDSSGAGDSRSTAKTSADVV
AYKNVNDMPHKELMIQVDTRNEAVLLPIYGSLVPFHVATIRTVSGNQDTNRNCYIRIIFN
VPGTPFNPHDSNSLKNQGAIYLKEVSFRTKDSRHSSEVTQQIKTLRRQVMARESERAERA
TLVTQEKLQLAGNKFKPLRLSELWIRPPFSGRKKIPGTLEAHANGFRYSTTRPDERVDVL
FANIKHAFFQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGGRRSAYD
PDEIDEEQRERDRKNKINMDFNHFANRVNDMWQLPQFASLDLEFDQPLRELGFHGVPHKT
SAFIIPTSSCLVELIEYPFLVVSLSEIEIVNLERVGFGQKNFDMAIIFKDFKKDVLRVDS
VPTSSLEGIKEWLDTTDIKYYESKLNLNWRQILKTITDDPQSFIDDGGWEFLNLDGSDSE
SGGSEESDKGYEPSDVEVESESEDEASESESLVESDDDEEEDSEQESEEEKGKTWDELER
EATNADREHGVESDSEEERKRRKMKAFGKSRPGTSGGGGSSSMKNMPPSKRKHR
NT seq 3225 nt   +upstreamnt  +downstreamnt
atggcagactctcggaatggtaatgcccgagcccctcctagtggagtgcctccaaaagct
gggaatacttattccatagatgttaaaaactttatctcacgtgcaagagcattgtatgaa
cactggaagaagcacagtgcagacttatggggatctgccgacgctcttgccattgctacc
cctcctgcttctgatgatctgcgttacctgaaatcttcagcgttgaatatttggcttctt
gggtatgagtttccagatacaattatggtttttaccaagaagcagatccatttcctgtgt
agtaggaacaaggcttctctacttgaagttgtgaaaaaacctgcacatgatgagttgaag
cttgatgttatcatgcatgttaagcctaagggtgatgatggaacagggctgatggatgcc
atatttcgtgccatccgtgatctatcccggggtgatggaaatgattcacaagttgttgga
cacattgctcgtgaagcccctgaaggtaagcttctggagacatggactgagaggctaaag
aatgcaaacttccagttcgtagatataactggggggctgtctgatctatttgctgttaaa
gacgatactgaggtcatgagtgtgaagaaagctgcgtatctagcctacagtgtgatgaaa
aatgttgttgttccaaatcttgagagtgccattgatgaggagaaagacgtcacccactct
gccctgatggatctcactgagaaagcgatacttgagccaactaaggccagtgtgaaactg
aagccagagaatgttgacatatgctaccctccgatatttcaaagcggaggcaagtttgat
ctcaaaccaagtgctgcaagcaatgatgaactgctcacttatgatccagcgagtatcata
atatgtgctgttggtgctaggtataatagttattgctcaaatgttgccaggacctaccta
atagatgcaacttctctccagagcaaggcatatgaggttcttctcaaggcacatgaggct
gctattgatgctttgaggtcaggaagaaagataaacactgtctatcaagctgccctttct
gttgttgaaaagaatgcccctgagttcgttgacaagctaactaaatctgctgggactggt
atcggtctggaattccgagagtcaggattaaatataaatgcaaagaatgataaagtattg
agaccgaagatggcatttaatgtgtctcttggtttccagaacttggaatgtgagtcagaa
agccgcagcaagaacaagaaattctcacttttgctagctgacacagttctcgtcacagat
cagaaaccggagcttttaaccaagtgctctaaatctgttaaggatgtggcttactccttt
aaagaggatgaagaagaagagaaaccgcgcaagaaagctaggaccagtggttctgagaac
tacattaccaagacagctcttagatcagatgatcatgtggtgtctaaagaagagctacgg
aagcagcaccaggcagagctggcacgccagaaaaatgaagaaactgccagaaggcttgct
ggtgacagttctggggcgggagacagccggtctactgcaaagacttcagctgatgtggtt
gcctacaagaatgttaacgacatgccccataaggaattgatgatccaggttgatacgaga
aacgaggctgtattgttacccatctatgggagcttggttccattccatgtggctacaata
agaacagtgtcaggcaatcaagataccaaccgaaactgctacatccgtatcattttcaat
gtcccgggtacacccttcaaccctcatgactcaaactctttgaaaaaccagggtgctatc
tacctcaaggaggtttcattccggaccaaggattcaaggcatagcagcgaagtaactcaa
cagattaagacccttagacggcaagtcatggccagggagtcagagagagctgaaagggcg
acattggtgacccaagagaaacttcagcttgcagggaacaagttcaaacccctcaggttg
tccgagctgtggatccgtccgccttttagtgggcgcaagaagattcctgggacactcgaa
gctcatgcaaatggtttcaggtattcaactaccaggcctgacgagcgcgtggatgtcctg
tttgcaaacataaagcatgcgtttttccagcctgctgagaaggagatgatcaccctcctt
cattttcatttgcacaaccacatcatggtaggaactaagaagacaaaggacgttcaattc
tatgtggaggtaatggatgttgtgcagtctttaggtggtgggaggagatcagcctatgat
ccagatgagattgacgaagaacagagggagcgcgataggaagaacaagatcaacatggat
ttcaatcattttgcaaaccgggtgaatgatatgtggcaactaccacagtttgcaagtctg
gaccttgagtttgatcaacctctgagagagcttggtttccatggtgttccgcacaagaca
tctgcattcataataccgacctccagctgcttagttgagctgatagaatacccgttcctc
gtggtgagtctgagtgagattgagattgtgaatcttgagagagttgggtttgggcagaag
aactttgacatggccatcatcttcaaggacttcaaaaaagatgttctcagggttgactca
gttcccacaagctccctagaggggataaaggagtggctagacaccacagatataaagtac
tacgagagcaaactgaatctgaactggagacagatcctaaagacgatcacagatgatccg
cagagctttatagatgatggaggatgggagtttctgaacctggacggaagcgattcagaa
tctggcgggtctgaggagtcagacaaaggatatgaaccatcagatgtagaggttgagtct
gagtcagaggacgaggcttcagagagtgagtcactggtggagtcagacgatgatgaagaa
gaggactcagagcaagagtcagaggaagagaaaggtaagacttgggatgaactggagaga
gaagctactaatgcagacagagagcatggagttgagtctgatagcgaggaagagaggaag
agaagaaagatgaaagcgtttgggaaatcgcgacctggaactagcggtggaggtggtagt
agcagcatgaagaacatgccaccatctaaacgcaagcacaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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