KEGG   Arabidopsis thaliana (thale cress): AT4G12620
Entry
AT4G12620         CDS       T00041                                 
Symbol
ORC1B
Name
(RefSeq) origin of replication complex 1B
  KO
K02603  origin recognition complex subunit 1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ath03032]
    AT4G12620 (ORC1B)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT4G12620 (ORC1B)
DNA replication proteins [BR:ath03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   pre-RC (pre-replication complex)
    AT4G12620 (ORC1B)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     AT4G12620 (ORC1B)
SSDB
Motif
Pfam: AAA BAH AAA_lid_10 PHD AAA_16 AAA_22 PHD_2 SLFN-g3_helicase Cdc6_C AAA_11 AAA_19 TIP49 Latexin_N GvpD_P-loop NACHT
Other DBs
NCBI-GeneID: 826875
NCBI-ProteinID: NP_192999
TAIR: AT4G12620
UniProt: Q9SU24 A0A178UTR9
Structure
Position
4:complement(7459609..7462447)
AA seq 813 aa
MASTPRAKTFKSPTKTPSNIYRKSYLSPSSTSHTPQTPETHTPLRRSARHVSRKIDLGND
PIDAPGNDPIEGMNLIRKRERAPRKPTTDVVPSKSKKTETPKKKKKIDSFTPVSPIRSET
IKKTKKKKRVYYNKVEFDETEFEIGDDVYVKRREDSNSDEEEDPEIEDCQICFKSDTNIM
IECDDCLGGFHLKCLKPPLKEVPEGDWICQFCEVKKSGQSQTLDLPKPPEGKKLARTMRE
KLLSGDLWAARIDKLWKEVDDGVYWIRARWYMIPEETVSGRQPHNLKRELYLTNDFADIE
MECILRHCSVKCPKEFSKASNDGDDVFLCEYEYDVHWRSFKRLAELADGDSDSDQEWNGR
KEEEVDDSDEEMELDDEVLKSKRGGLTSARGGANSRKGRFFGVEKVGMKLIPEHVRCHKQ
SELEKAKATLLLATRPKSLPCRSKEMEEITSFIKGSISDDQCLGRCMYIHGVPGTGKTIS
VLSVMKNLKAEVEEGSVSPYCFVEINGLKLASPENIYSVIYEALSGHRVGWKKALQCLNE
RFAEGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLVVLGIANTMDLP
EKLLPRISSRMGIQRLCFGPYNHTQLQEIISTRLNGIDAFEKTAIEFASRKVAAISGDAR
RALEICRRAAEVADHRLNTNKSAKNQLVIMADVEAAIQEMFQAPHIQVMKSVSKLSKIFL
TAMVHELYKTGMAETTFDRVATTVSSICLTNGEAFPGWDILLKIGCDLGECRIILCEPGE
KHRLQKLQLNFPSDDVAFALKDNKDLPWLANYL
NT seq 2442 nt   +upstreamnt  +downstreamnt
atggcttcaactccaagagcaaaaaccttcaaatccccaaccaaaactccgtctaacatc
tatcgcaaatcgtatctatctccatcttcaacctcacacactcctcaaaccccagaaact
cacactcctctccgtagatctgctcgtcatgtttctcgtaaaatcgatctgggaaatgac
ccaattgatgctccaggaaatgacccaatcgaaggaatgaatctaattcgaaaacgagaa
cgtgcccccagaaaaccaaccactgatgtcgttccatcgaagtcgaagaaaacagaaact
ccgaagaagaagaagaagatagattccttcactcctgtttcaccaattagatctgagacg
attaagaagacgaagaagaagaagagagtttattacaataaagtcgaattcgacgaaacc
gaattcgaaatcggtgatgatgtttacgttaagagaagagaagattcgaattcagatgaa
gaagaagatccagaaattgaagattgtcagatttgtttcaaatcagatactaacataatg
attgagtgtgatgattgtttaggtggatttcatttgaaatgcttgaaaccgccattgaag
gaagttcctgaaggtgattggatctgtcaattctgtgaggttaaaaagtctggtcaaagt
caaacacttgaccttcctaagccaccggaagggaagaagttagcgagaactatgagggag
aagctactttccggtgatctatgggctgctcgaatcgacaagttatggaaagaagttgat
gatggtgtgtattggattcgtgctcgttggtatatgatacctgaagagaccgtttcgggg
cgtcaaccgcataatctgaaacgagagctttatttgacgaatgattttgctgatatagag
atggaatgtattcttaggcattgttctgtcaagtgtcctaaggagttttcgaaagctagt
aatgatggtgatgatgtgttcttgtgtgagtatgagtatgatgttcattggcgtagcttt
aagcgtttggctgaattggctgatggagattctgatagtgatcaagagtggaatggtagg
aaggaggaggaggttgatgatagtgatgaagagatggagcttgatgatgaagttttgaag
agtaagcgaggaggtttgactagtgcaagaggaggtgcgaactctcgtaaagggagattc
tttggggttgagaaggtggggatgaagctgattcctgaacatgtgagatgtcataagcag
agtgagttagaaaaggcgaaagctactttgttgttggctacacgtcctaagtctcttcct
tgtagaagcaaagaaatggaagagatcacttcgtttataaaaggttcaatctcggatgat
cagtgtttaggaagatgtatgtatattcatggtgttcccgggactgggaagactattagt
gtgttatcggttatgaagaatctgaaggctgaggttgaagagggaagcgtaagcccttat
tgctttgtggagatcaatggtctcaaattggcttcacctgagaacatttacagtgtaatc
tatgaagcattgagtggtcatcgagtcggttggaagaaagctctacagtgtctaaatgag
aggtttgcagaaggaaaaaggattggtaaagaggatgagaagccttgcatacttctcatc
gacgaacttgatcttctagtaactagaaaccagtctgttttatacaacattcttgattgg
cctaccaagcctaactccaaattagttgtgttgggaatagcaaacactatggatcttcca
gagaagctgcttcctcggatttctagccgaatgggtatacagagactatgtttcggtcct
tataaccacactcagctacaagaaatcatttctacaaggttgaatggaatagatgctttc
gagaagacagctattgaatttgcttcgagaaaagtagctgcgatttcaggagatgcaaga
cgtgcgcttgagatatgcaggcgtgctgcagaagtagcggatcaccgtctaaatactaac
aaatccgcaaagaatcagctggtgattatggcagatgttgaagcagctatccaagagatg
tttcaggcacctcatattcaagtgatgaagagcgtgtcaaaactgagtaaaatcttcttg
acggctatggttcatgagctttacaaaacaggaatggcagagacaacatttgaccgagtg
gcaacgacagtatcgtctatctgcttaaccaatggagaagcttttccaggttgggacatt
cttcttaaaatcggttgcgatcttggtgaatgtaggatcattctctgtgaacctggagag
aagcatagattgcagaagctgcagctgaattttccaagtgatgatgttgcttttgcattg
aaagacaataaggatcttccatggctggccaattacttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (15)   
   Pfam (15)   
All databases (63)   

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