KEGG   Arabidopsis thaliana (thale cress): AT4G16144
Entry
AT4G16144         CDS       T00041                                 
Symbol
AMSH3
Name
(RefSeq) associated molecule with the SH3 domain of STAM 3
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT4G16144 (AMSH3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ath01002]
    AT4G16144 (AMSH3)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT4G16144 (AMSH3)
   04121 Ubiquitin system [BR:ath04121]
    AT4G16144 (AMSH3)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     AT4G16144 (AMSH3)
Peptidases and inhibitors [BR:ath01002]
 Metallo peptidases
  Family M67
   AT4G16144 (AMSH3)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Others
   Others
    AT4G16144 (AMSH3)
Ubiquitin system [BR:ath04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    AT4G16144 (AMSH3)
SSDB
Motif
Pfam: USP8_dimer JAB Prok-JAB
Other DBs
NCBI-GeneID: 827303
NCBI-ProteinID: NP_680708
TAIR: AT4G16144
UniProt: A0A2H1ZEN3
Position
4:complement(9137789..9141772)
AA seq 422 aa
MKIDLNKVAREIEVDNRIPLRNYYRIADNLLRQASIYREEKNVVDLYIMLLRYSSLISET
IPFHRDYQASLPQERLGSRKRLRAVINELESLKPEFNQLVDKLNRVEDESRQDGSDLPVV
SYSSDAVEWPPAHKASYSRPDINKPLPTSQPSWTYNNNLTSSSNRTQIDQQFQKLSFDFL
PPNQATLSRHSFLGPNGLKRQMVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSSSSASLN
GDSQEVSTLNSVLSLDDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQVHQE
LAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLETCGV
LAGSLKNRVFHITTLIIPKQESTSDSCQTLNEKKYSSTGQTLSISLGLDSYTPYTNLLHV
IS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaagattgatctgaacaaggtggctcgtgaaatcgaagtggataatcgtattcctctc
cgtaattactaccgcatcgccgataatctcctccgacaggccagtatatatcgcgaagag
aagaatgtggtggatttgtatatcatgcttcttagatattcaagtttgatttctgaaaca
attcctttccatcgagattaccaggcatcgcttccacaagaaagacttgggagtaggaag
aggttgcgtgctgtaatcaatgagctcgagtctctgaaaccggaattcaaccagctagtg
gataagctgaacagagttgaggatgaatcccgtcaggatggaagtgatctcccggtcgta
tcatatagttcagatgctgttgagtggcctcctgctcacaaagcttcatactccagacct
gatattaacaagcccttaccgacatctcaaccatcctggacgtataacaataatctgact
tcatcatcaaatcgtacacagattgatcagcagttccagaagctatcttttgatttcctg
cctccaaaccaagcaaccttgtcaagacattcatttctaggtccgaatggtcttaaaagg
caaatggttgcacccaagtcagagataaaggttcaatatccgagtaatacagattggggt
tctgcggacaattcaggtttaattgaagctggacctagcagttcctcagcatcacttaat
ggtgattctcaagaagtctcaacactgaactctgtgctctccttagatgatggtcgatgg
cagcgtcattctgaggcagtaaattcccagtttattagcgacgcaactgaagacccgttt
cagtttgtcggtatgaagcaaccttcccctcctcccgtgcttgctcaagtgcatcaagag
ttagcccaaatttgcccatctaaagtagctgatcctagaccaggacctgcaattccttcc
ctagaaggaaaagagggcagcaattcttatcagcatttgcatgtgcctgtgcgcataatg
gatgatttcctaaggctagctcggtcaaacacagaacggaatttagaaacttgtggagta
cttgctggttctctgaaaaacagggtttttcatatcactactctcataatcccaaagcag
gagtctacctcagattcttgccaaacactaaacgagaagaaatattcgagtacaggacag
actctctctatttcccttgggttggattcatacacaccctacacaaacttgcttcatgtc
atcagttga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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