KEGG   Arabidopsis thaliana (thale cress): AT4G18180
Entry
AT4G18180         CDS       T00041                                 
Name
(RefSeq) Pectin lyase-like superfamily protein
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00040  Pentose and glucuronate interconversions
ath01100  Metabolic pathways
Module
ath_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AT4G18180
Enzymes [BR:ath01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     AT4G18180
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix Fungal_KA1
Other DBs
NCBI-GeneID: 827543
NCBI-ProteinID: NP_001319980
TAIR: AT4G18180
UniProt: A0A654FQN4 F4JQS2
Position
4:10065291..10067521
AA seq 422 aa
MYIEMENFRYLKFFFFFIFVILSPSEAGNIVDKSSVFLVDVRSFGARANDHRDHTKAFVA
AWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNLTVRVKGHLKASTDLSKYRSGG
GWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRISS
VNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVSIG
QGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANSPG
LSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSSLVA
VQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNEAVSSSCRNVRANYIGTQIPPP
CH
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtacatcgagatggagaattttcgttacctgaaatttttcttcttcttcatctttgta
atattatctccttctgaagcaggaaatatagtagacaaaagctctgttttccttgttgat
gtccgtagctttggtgctcgagctaatgaccacagagaccacaccaaggcctttgtagca
gcatgggacaaagcatgcaaatcatcttcaagctctgtgaatcttataatcccaagaggt
gaattctctgttggttctctcagattctctggtccttgcactaatgtatccaatctcact
gtccgagttaagggtcatctcaaggcatcaactgatctgtcaaagtatagatcaggcggt
ggttggattcagtttggatggatcaatggcttaactcttaccggaggtggaacatttgac
ggtcaaggcgctttagcttggccgtttaataactgtacttctgattctaactgcaaactc
cttccaactagcttgaagtttgtggggatgaacagaacagttgtgagaaggataagctca
gtgaatagcaagttctttcatatagcattagtagaatgcagagacttcaaagggacaaga
ctcaacatcactgctccttctgatagtccaaatacagatggtatacatatcgaacgcagt
tcgaatgtgtatttctcgcgttcacatatcgcaactggagatgattgtgtctcgatagga
caaggaaattctcagattacaatcacaagtatcaaatgtggaccaggacatggtatcagc
gttgggagtttagggagatatccaaatgagaaagatgttaatggactggtggtgaaggat
tgcaagataagcggtacgacgaatgggataaggatcaaaacttgggctaattctcctggt
ctaagtgctgctaccaacatgacttttgagaatattattatgaacaatgtgactaatcca
atcatcattgatcagtcttattgtcctttctcttcttgcatttcaaatgtaccttcaaag
gttgagctgagtgagatatacttcaagaatataagagggacatcatcttcactggtcgcg
gtgcagctgcattgtagcagaggaatgccatgtaaaaaagtgtacttagagaatgttcat
cttgatctttcttcgtctgatggaggaagaaaacagagtagtaacagaggaaatgaagct
gtctcttcttcttgtagaaacgttagagctaattacattgggactcaaatcccacctcca
tgtcactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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