KEGG   Arabidopsis thaliana (thale cress): AT4G25290
Entry
AT4G25290         CDS       T00041                                 
Name
(RefSeq) DNA photolyase
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: DNA_photolyase Abhydrolase_1 Abhydrolase_6 Hydrolase_4 RickCE_cat
Other DBs
NCBI-GeneID: 828632
NCBI-ProteinID: NP_194259
TAIR: AT4G25290
UniProt: F4JSJ6
Position
4:complement(12941242..12945052)
AA seq 692 aa
MAFLALPHFLHLRLRRNDRKNRCKCCLSSATNEGSTAVVWFKHDLRVDDHPGLLAASKHR
AVIPLYVLDRRILSRYTTDTLELAIIALEDLRKTLKKQGSNLMLRYGNAENVIEDLVKEV
RAPFVFVEEEVEYHLCEVLDAVKNKLEGVSLSGESPRIVAWRTPFYESQNLTDLPQSWEE
FKKLKLPLTLPVPAAKFSSPGSELQWGSVPTLDDLKDYLKESLWEIENSWREMAQASAER
VLMERLGNLKESSMEPIVDGSLGKKVDNSVFVTSKRDTVGGGNEVVLNALAGYLRYLEGT
SRDDWQEVHARLRDAETRPGASFFKLFGPVLCLGIVSRRSVHYEAIEYEKERNAGFISPF
GYSAATVSAATDAVCSMEWYYLLALSRERIDEKRHAIRIWRWKGYLIQYTVVGNEGPAVL
LVHGFGAFLEHYRDNVDNIVNSKNRVWTITVLGFGKSEKPNIIYTELLWAELLRDFMAEV
VGEPAHCVGNSIGGYFVALMAFLWPALVKSVVLVNSAGNVVPGYSPLPISRERRVPFGAQ
FGSRLLLFFLQLNVKKLLKDCYPVKPERADDFLVTEMLRASRDPGVVMVLESIFGFDLSL
PLNYLLKGFEEKTLVIQGMEDPISDPQKKVALLKELCPAMVIKKVKAGHCPHDEISEEVN
PIICEWIVKVTNDDRELKASSSQQLYHSNKQN
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggcgttcctcgctctcccgcatttcctgcatctccgtctccggcggaatgatcggaaa
aaccgatgcaaatgttgtttgtcttcggcaacgaatgaaggttccacggcggttgtgtgg
tttaaacatgacctacgtgttgatgatcatcctggcctcctcgctgcgtctaagcacaga
gccgtcatacctctctacgtcctcgatcgtcgcattctatcgagatacacaacggacact
ttagagctagctattatagcattggaagatttgagaaaaaccttgaagaagcaaggatca
aatcttatgctcagatatgggaatgcagagaatgtcattgaagatcttgtcaaagaggtg
cgagctccttttgtctttgtggaagaagaggtagaataccatctgtgtgaggttttagac
gctgtaaagaataaattggaaggtgtttctttatctggagaatcaccgaggattgttgct
tggcgtactcctttttacgagagccaaaatttgacagatctaccacaatcttgggaggag
tttaagaaactgaagctgcctctcactttgccagttcctgcagcaaaattttcatctcca
ggaagtgaattgcagtggggttctgtgccaacgctcgatgacctgaaggactatttgaag
gaaagcttatgggaaatagaaaatagttggagggaaatggcacaggcatctgctgaaaga
gtattaatggaaaggcttggtaacttgaaggaaagcagtatggagccaattgttgatgga
agtttagggaagaaggttgataactctgtttttgtcacaagtaaaagagatactgttgga
ggtggaaatgaggttgtactgaatgctctagcaggatacttgaggtacttggagggtaca
agtcgagatgactggcaagaggtccatgcgagacttcgtgatgccgagactaggcccgga
gcttcatttttcaaactttttggacctgtcctctgtcttggtatcgtatccagaagaagt
gtccactatgaagcaatcgagtatgaaaaagaaaggaatgctggatttatttctcctttt
ggatattcagctgccacagtgtctgctgcaactgatgctgtatgctctatggagtggtat
tatctcctggctctaagtagagagaggattgatgaaaaaaggcacgctataaggatttgg
agatggaagggatatcttattcagtacacagtggttggtaatgaagggcctgccgttctt
cttgtgcatggctttggtgcttttctagagcattaccgcgataatgtagacaacatcgta
aatagcaaaaatcgagtatggaccatcacagtcttgggttttggaaaatcagagaagcca
aatatcatttacaccgagcttttgtgggctgaattactgcgggatttcatggctgaagta
gttggggaaccagcacattgcgtagggaattcaatcggtgggtatttcgttgcattaatg
gcctttctttggccggcgttggttaagtccgttgtccttgttaacagtgccggcaatgtg
gtacctggatactctcctctcccaatctctagagaaaggcgagttccatttggtgcacaa
tttggttctcgacttcttctctttttcctacaactcaatgtcaaaaagctattaaaggat
tgttatccagttaaacctgagagagctgatgactttcttgtcactgaaatgctaagagca
tctcgagaccctggtgtggttatggtcctggaaagtatctttggctttgatctttcgctt
cctttgaattacctactcaaagggtttgaggaaaaaactctagtaatacagggaatggaa
gatcccatatcggatccgcagaagaaagtagccttactgaaggagctttgtccagcgatg
gtgataaagaaagttaaagcaggtcactgtccccacgatgaaatctcagaagaggtaaat
ccgattatctgcgaatggatagtgaaggtcactaatgatgatcgagaactaaaagcctca
tcatcccagcaactttaccacagtaataaacaaaactaa

  All links  
Gene (13)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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