KEGG   Arabidopsis thaliana (thale cress): AT4G36390
Entry
AT4G36390         CDS       T00041                                 
Name
(RefSeq) Methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT4G36390
Enzymes [BR:ath01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     AT4G36390
Transfer RNA biogenesis [BR:ath03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    AT4G36390
 Prokaryotic type
   Methylthiotransferases
    AT4G36390
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2 PG_1098_N Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 829791
NCBI-ProteinID: NP_195357
TAIR: AT4G36390
UniProt: Q8H0V1 A0A178UV64
Position
4:complement(17194573..17197247)
AA seq 640 aa
MASSSLSSLSSILSNPHGCSLCFKASTQRCFALRFLSSKATHASSSSSSALLPRCRSSTH
RLTQKPINRKKGFSLNLSRSFSISQIASSGKFDGPSLHQFVSNAQAHASLTTPETESEST
LDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIREN
AEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVV
CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMC
AFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSADRESGANWEY
SEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNL
IHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQET
LSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQ
VGSTQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGDDLKRNPGIGDFV
EVQIEKSTRASLFGEALAISKMSLFHDVGVVDAVVASCAS
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcgtcttcttctctctcgtctctctcctcaatcctcagtaaccctcatggttgctct
ctctgtttcaaagcctctacacaacgttgtttcgctcttagattcctctcctcaaaagca
acccatgcttcttcatcttcttcctctgctcttctccctcgttgccgtagcagcacccat
cgtctcacacagaaaccgatcaataggaagaagggattttccttaaatctttctagaagc
ttctctatttctcaaattgctagttccggtaagtttgatggtccaagcctccaccagttc
gtctccaacgctcaagcacacgcttctcttaccactcccgaaactgaatctgaaagcaca
ctagattctgacattgcatcaaaaggtcggatttatcacgaaacatatggatgtcagatg
aacataaacgacatggagatagtccttgcgataatgaaaaactctggttataaagaagta
gtgacggatcctgagagcgcagaagtcattttcgtaaacacttgtgctatcagagaaaat
gcagagcaaagagtatggcaaagacttaactacttttggttcttaaaacgagaatggaaa
gtaaatgctgctacaggaagagcaaaatctctcaaacctcctaaagttgttgttttggga
tgtatggctgaaagattaaaggacaagattctagattctgataaaatggttgatgttgtt
tgtggtcctgatgcttatagagatctcccgaggctattggaagaagtagactatggtcaa
aaaggaatcaacactcttctttctctagaagagacttatgctgacatatcccctgtccga
atctctgaaaactcaattaccgcttttgtttctgttatgagaggctgcaacaacatgtgt
gctttctgcattgttccgtttaccagaggcagagagcgatcacgtcctgtagaatctata
atccgcgaggttggggagttgtgggaatcgggtgtgaaagaagttacgcttttagggcaa
aatgtgaacagctataacgatgattcagctgatcgtgagtcaggtgctaactgggaatac
agtgagggattctcgagccggtgtaaagttaaaaacatgggtttgcgatttgctgatctc
ttggaccgactctctgtagagtttccagagatgcggtttaggtttacatcgcctcatcct
aaagattaccctgacgagttgctgtatttgatgagagatagacataatatctgcaatctc
atccatcttcctgcacaatctggtaatagcagaatactagaacaaatgcgtagaggttac
accagagaagcttatttggatcttgttaaaaagattcggagtattataccagatgtggct
ataaccagcgactttataactggcttctgtggagaaactgaagaagagcatcaagaaacc
ctaagcttggtgagagcagttggatacgatatggcgtatatgtttgcatacagcatgaga
gaaaagacacatgctcatcgcaactacacagacgacgttccagaggaggtgaaacagaga
cgtttaacagaactcatcgacgcattccgcgaaacaacaggtccgtgttatgactctcag
gtaggatcaactcagttagttctcgtcgaaggaccaaacaagagagcgcctgagacagaa
ctcattggaaaaactgataaaggacacagagtttcgtttgtcacgaagcctctgtttgat
aaagcgtgtcttcttgatggtgatgatctgaagaggaatcctggaattggggattttgtt
gaggttcagatagagaaatcaacgagggcatcgttgtttggggaagctctcgcgattagt
aaaatgtccttgtttcacgatgttggtgtcgtcgatgctgttgttgcgtcttgtgcaagt
taa

  All links  
Gene (20)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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