KEGG   Arabidopsis thaliana (thale cress): AT4G39850
Entry
AT4G39850         CDS       T00041                                 
Symbol
ABCD1
Name
(RefSeq) peroxisomal ABC transporter 1
  KO
K25819  ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:7.6.2.4]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath02010  ABC transporters
ath04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    AT4G39850 (ABCD1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    AT4G39850 (ABCD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ath02000]
    AT4G39850 (ABCD1)
Enzymes [BR:ath01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.4  ABC-type fatty-acyl-CoA transporter
     AT4G39850 (ABCD1)
Transporters [BR:ath02000]
 ABC transporters, eukaryotic type
  ABCD (ALD) subfamily
   Others
    AT4G39850 (ABCD1)
SSDB
Motif
Pfam: ABC_membrane_2 ABC_tran AAA_21 AAA_23 AAA_29 AAA_16 SMC_N DEAD nSTAND1 AAA_30
Other DBs
NCBI-GeneID: 830144
NCBI-ProteinID: NP_001328232
TAIR: AT4G39850
UniProt: Q94FB9
Position
4:18488434..18497266
AA seq 1337 aa
MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSD
DDETLEKLTATDQNAKITTKKKKGGGLKSLQVLTAILLSQMGKMGARDLLALVATVVFRT
ALSNRLAKVQGFLFRAAFLRRAPLFLRLISENIMLCFMLSTLHSTSKYITGALSLRFRKI
LTKIIHSHYFENMVYYKISHVDGRITHPEQRIASDVPRFSSELSDLILDDLTAVTDGILY
AWRLCSYASPKYIFWILAYVLGAGTAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSE
SIAFYGGETREESHIQQKFKNLVSHMSHVLHDHWWFGMIQDFLLKYLGATVAVILIIEPF
FSGHLRPDDSTLGRAEMLSNIRYHTSVIISLFQALGTLSISSRRLNRLSGYADRIHELMA
VSRELSGDDKSSFQRNRSRNYLSEANYVEFSDVKVVTPTGNVLVEDLTLRVEQGSNLLIT
GPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYMAVGTLRDQLIYPL
TSGQESELLTEIGMVELLKNVDLEYLLDRYQPEKEVNWGDELSLGEQQRLGMARLFYHKP
KFAILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHY
KRDDSALLTDAEIDSVKSSDTDRQNDAMVVQRAFAAARKESATNSKAQSYQTQLIARSPV
VDKSVVLPRFPQPQTSQRALPSRVAAMLNVLIPTIFDKQGAQLLAVACLVVSRTLISDRI
ASLNGTTVKYVLEQDKAAFVRLIGLSVLQSGASSIIAPSLRHLTQRLALGWRIRLTQHLL
RNYLRNNAFYKVFHMSGNSIDADQRLTRDLEKLTADLSGLLTGMVKPSVDILWFTWRMKL
LTGQRGVAILYTYMLLGLGFLRRVAPDFGDLAGEEQQLEGKFRFMHERLNTHAESIAFFG
GGAREKAMVDKKFRALLDHSLMLLRKKWLYGILDDFVTKQLPNNVTWGLSLLYALEHKGD
RALVSTQGELAHALRYLASVVSQSFMAFGDILELHKKFLELSGGINRIFELDEFLDASQS
GVTSENQTSRLDSQDLLSFSEVDIITPAQKLMASKLSCEIVSGKSLLVTGPNGSGKTSVF
RVLRDIWPTVCGRLTKPSLDIKELGSGNGMFFVPQRPYTCLGTLRDQIIYPLSKEEAEKR
AAKLYTSGESSTEAGSILDSHLKTILENVRLVYLLERDVGGWDATTNWEDILSLGEQQRL
GMARLFFHRPKFGVLDECTNATSVDVEEQLYRVARDMGVTFITSSQRPALIPFHSLELRL
IDGEGNWELRSIEQTTE
NT seq 4014 nt   +upstreamnt  +downstreamnt
atgccttcacttcaactattgcagttaactgagcggggtcggggtcttgtagcgtcaaga
cggaaatctatactgcttgcggctgggattgtagctgctggtggaactgctgtttacctg
aaatcaagggtcgcttcccggaggcctgattcttcgcgtctttgcaatggtcagagtgat
gatgatgagactttggaaaagctgactgcaactgatcaaaatgcaaagataaccacgaaa
aagaagaaaggaggaggattgaagtctcttcaggttctgactgctattcttctctctcag
atgggaaaaatgggtgccagggatcttttggcactagtcgccaccgtggttttcagaaca
gctttgagcaatagattggcaaaagtgcaaggtttccttttccgtgctgctttcttaagg
cgtgcgccactgtttctacggctcatctccgagaatattatgttgtgtttcatgctatca
acattgcactctacttcaaagtacataactggggcattgagtttgcgattcagaaagata
ttgaccaagattatccattcacactattttgagaatatggtatattacaaaatatcacac
gtggatggtcggattacgcaccctgaacaaagaattgccagcgatgtaccaagattctcc
tcagagttgagcgatcttatactggatgatttgacggcggttactgatggaattttgtat
gcatggcgcctgtgttcatatgctagtccaaaatacatcttctggatactggcctatgta
ctgggggctgggacggcgataagaaacttttctccttcttttgggaaattgatgtccaag
gaacagcagttagaaggagagtaccggcaacttcattcacgcttaaggactcattcggaa
agcatagcattctatggtggggaaaccagggaagaatctcatatacaacaaaagttcaag
aatcttgttagccatatgagtcacgtgcttcatgatcactggtggtttggtatgatccaa
gattttctgctgaagtatcttggggccacagttgcagttattctgattatcgaaccattc
ttctctgggcatctaagacctgacgactcgaccttaggaagagctgagatgcttagcaat
ataagatatcacactagtgtcattatatctctctttcaggcgttgggaacactttctata
agttccaggcggctcaaccgactcagtggttatgctgaccgaatccatgagttgatggct
gtctcaagagaactcagtggtgatgataaatcgtctttccagagaaatagaagcagaaat
tatctaagtgaagctaattatgtagagttttccgatgtcaaggttgttactccaaccgga
aatgttttggtggaggatctcacccttcgagttgagcaagggtctaatcttctgattaca
ggtcctaatggaagtggcaagagttcccttttccgagtattaggaggtctatggcccctg
gtgtctggacatattgtgaagccaggagttggttctgatcttaacaaggagatcttctat
gtgccgcaacggccttatatggcagtaggaacacttcgtgaccagttaatatatcctctt
acttctggccaagagagtgaactgctcactgagattggaatggtggagctattgaaaaat
gttgatctagaatatttattggatcgctaccaacctgaaaaagaggttaattggggtgat
gaattatctcttggagagcaacagagattgggtatggccagactattctaccacaaaccc
aaatttgcaattctagatgaatgcacaagtgctgtcacaactgatatggaagaacgcttt
gccgctaaggttcgagctatgggaacttcttgcataacaatctcccatcgtccagcgctt
gttgcattccatgatgttgttctgtcattagacggtgaaggaggatggagtgttcattac
aagagggatgactctgcccttctgacggatgctgaaattgattcagtgaaaagttcagat
acagatcggcaaaatgatgcgatggttgttcaacgagcgtttgctgcagctagaaaggaa
tctgctactaattcaaaggctcagtcgtaccagacacagttaattgcaagatcacctgtt
gtagataaaagtgtagtgttgcctcgttttcctcaacctcaaacatcccaaagggcttta
ccatcaagagtagctgcaatgttaaacgtgttgatacccactatatttgacaagcaagga
gctcaactgcttgctgttgcttgccttgtcgtctcaagaacgctgatctctgaccgaata
gcctctttgaatgggaccactgtgaagtatgtcttggagcaagataaggcagcctttgtt
cgtttgattggtttgagtgttctccaaagtggtgcatcttctataattgctccttcacta
aggcatttaacgcaaaggctagcgttagggtggaggattcgtttgactcaacatctgcta
aggaactatttgagaaataatgcgttttacaaggttttccacatgtcaggcaatagtatt
gatgcggaccagagactcactcgtgacctggaaaagttaaccgctgacttgtctggactt
cttactggaatggtaaagccatcggttgacattctctggttcacctggaggatgaagtta
ctgactggtcagaggggagttgccatactttacacatatatgttacttggtcttggtttt
ctgagacgtgttgctcccgatttcggtgatctagccggtgaagaacagcagcttgaaggg
aagtttcggtttatgcacgagaggctgaacactcatgctgaatctattgcattctttgga
ggtggagctcgagaaaaggctatggttgacaaaaaattcagggccctactggatcattct
ctcatgctcttgaggaagaaatggttgtatggcatacttgatgattttgtgacaaagcaa
cttcccaataatgtgacgtggggattgagtttattgtatgccctagaacacaagggagac
agagcacttgtctccactcaaggtgaattggcacatgcattgcggtatctagcttctgtt
gtctcccaaagctttatggcttttggcgatattcttgaactacacaagaagttcctggag
ctctctggtggtattaacagaatttttgagctcgatgagtttttggatgcttctcagtca
ggtgttacctcagaaaatcaaacaagtcgtttggattctcaagatctactttccttttcg
gaggtggatatcattacccctgctcagaaattgatggctagcaagttgtcgtgtgaaata
gtttcagggaaaagcctgctcgtcacaggtccaaatggtagtggaaagacttcagtattt
agagtccttagagatatctggcccactgtatgtggaagacttaccaaaccatcattggat
atcaaagaacttgggtcagggaatggcatgttttttgtcccgcagcgaccttatacatgt
ttagggacactgagagatcaaattatataccctctatctaaagaagaagcagagaaaagg
gcagcaaagttgtacaccagtggagagagctcaacagaagctggaagcattctggattct
catttgaaaaccattctggagaatgttcggttagtttatctcttggaaagagacgtaggt
ggttgggatgctactaccaattgggaagacatattatctcttggagagcaacagagatta
ggcatggcacgtttattctttcacaggccgaagtttggagtccttgatgaatgcacaaat
gcgacgagtgttgatgttgaggaacagctctatagagttgcacgagacatgggagtcact
ttcataacctcatcacaacggccggctctgatcccattccattccttggagctaaggctg
attgatggagaaggaaactgggagctccgttcgatcgaacagacaacagagtga

  All links  
Gene (34)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (10)   
   Pfam (10)   
All databases (54)   

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