KEGG   Arabidopsis thaliana (thale cress): AT5G04360
Entry
AT5G04360         CDS       T00041                                 
Symbol
LDA
Name
(RefSeq) limit dextrinase
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: Pullul_strch_C Pullulanase_N2 CBM_48 C09G5_7_C
Other DBs
NCBI-GeneID: 830315
NCBI-ProteinID: NP_001330089
TAIR: AT5G04360
UniProt: Q8GTR4
Position
5:1221448..1228841
AA seq 965 aa
MALTLTPTSSVHLLSSISVARPRIFAADFNLRSRWRRRRPVTSISNFRLRLPSKTSLHCL
CSSSSASSPMSLEVSSPNSQFLDCLIYSRAYWVTQGVIAWNVDVGEGSCYFYASKSAGLS
FSEDGIDGYDLRIKLEAESGSLPADVIEKFPHIRNYKSFKVPKDLDIRDLVKSQLAVVCF
DAEGRLIQGTGLQLPGVLDELFSYDGPLGAHFTPEGVSLHLWAPTAQAVSVCIYKNPLDK
SPMEICPLKEANGVWSTEGACSWGGCYYVYKVSVYHPSTMKLETCYANDPYARGLSADGR
KTFLVNLDSDDLKPEGWDNLADKKPCLRSFSDISIYELHVRDFSANDETVEPENRGGYLA
FTSKDSAGVKHLQKLVDAGLTHLHLLPTFQFGDVDDEKENWKSVDTSLLEGLRPDSTEAQ
ARITEIQNDDGYNWGYNPVLWGVPKGSYASDPTGPCRIIEFRKMVQALNCTGLNVVLDVV
YNHLHASGPHDKESVLDKIVPGYYLRRNSDGFIENSTCVNNTASEHYMVDRLIRDDLLNW
VVNYKVDGFRFDLMGHIMKATIVNAKSAIGSLRKETDGVDGSRIYLYGEGWNFGEVAENG
RGINASQFNLGGTGIGSFNDRIRDATLGGSPFGHPLQQGFITGLLLQPNAHDHGSEATQE
LMLSTAKNHIQTGMAANLKDYMLTNHEGKEVKGSEVLMHDATPVAYASLPTETINYVSAH
DNETLFDIISLKTPMEISVDERCRINHLASSMIALSQGIPFFHAGDEILRSKSLDRDSYN
SGDWFNRLDFSYSSNNWGVGLPPKGKNEHNWPLIKPRLQDPSFKPKSSHIVATLHNFLDL
LRIRYSSPLFRLDTARAIQERVRFHNTGPSSIPGAIVMSIEDGHRGIPSVSQIDPIYSLI
VVIFNARPSEFSYPSPALKDRKLELHPVQVMSADEIVKKSVYDSFSGGFTVPARTTTVFV
ESRNG
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggcactgacactgacaccaacaagttccgttcatcttctcagttccatatccgtcgcg
cgtcctcggatcttcgccgctgattttaatcttcgatcgcggtggcgacgtcgtcggcct
gttacgtcaatttctaacttccgtctcagacttccttcgaaaacttcgcttcactgtctc
tgttcttcgtcttccgcttcatctcctatgtcgctcgaagtctccagtcccaattctcag
tttcttgattgtttgatctattcaagagcgtattgggttacccaaggcgtgattgcatgg
aatgtggatgttggtgaagggtcttgttacttttacgcgagcaaaagtgctggtttatca
ttcagcgaagatggaatcgatggttatgatttaagaatcaagcttgaagctgaatccggt
tcacttcctgcagatgtaattgagaagtttccacatattaggaattacaaatcgttcaaa
gttcctaaggatttggatatcagggatcttgtcaaaagccagttagctgttgtttgtttt
gatgcggaaggacggctgattcaaggaactgggttgcagttgcctggcgtcctggatgaa
ttgttctcatatgatggtcccctaggtgcacattttacaccagaaggtgtctctcttcac
ctctgggctcccactgctcaagcagtatctgtttgcatctataaaaacccacttgacaag
agtccgatggaaatttgcccactcaaagaggctaacggtgtgtggagcactgaaggagct
tgtagttggggaggatgctattacgtgtataaagtatcagtctatcatccaagcaccatg
aaattggaaacttgctatgctaatgatccttatgcacgggggctttcagcagatgggagg
aaaacttttctggttaatcttgattctgatgatctaaaacctgaaggatgggacaactta
gcagataagaaaccatgcctaagatccttctcagatataagtatttatgagctgcatgtg
agggatttcagtgccaatgatgagactgttgagcctgaaaatcgtggtggatatctggct
ttcacttcaaaggattctgcaggtgtgaaacatcttcagaaattagttgatgcaggtctt
acccatctacatcttcttccaacatttcagtttggtgatgttgatgatgagaaggagaat
tggaagtctgtagacaccagtctgctggaaggattacgacctgattcaactgaggcacaa
gctcgtattacagaaatccagaatgatgatggctataactgggggtataatcctgtgctc
tggggagtcccaaaaggaagctatgctagtgatccgactggtccatgccgcataattgaa
tttagaaaaatggttcaggctcttaattgtactggtcttaatgtcgtcttagatgttgtt
tacaaccacttgcatgcaagtgggccacatgacaaagaatctgttcttgataagatagtt
ccaggttactatttgagaaggaacagtgatggttttattgaaaacagtacatgcgtaaac
aacactgctagcgagcactatatggttgatcgtctcatacgggatgatctattaaattgg
gttgttaactataaggttgatggtttccgttttgatcttatgggtcatataatgaaagct
acaattgtaaacgcaaaatctgcaattggtagcttgagaaaggaaacagatggagttgat
ggttcaagaatttatttatatggcgaaggatggaactttggtgaagttgctgaaaatgga
cgtggaataaatgcgtcacagttcaatttaggcgggacaggaattggaagttttaacgac
cgtatacgagatgcaactcttggtggatctccatttggtcatcctcttcaacaaggattc
attacaggtttattgttacagcctaacgctcatgaccatggttcagaagctacacaggaa
ctgatgctttccactgcgaaaaatcacatccagactggtatggcagcaaatttgaaggat
tatatgctgaccaaccacgaaggaaaggaggtgaagggatcagaggttttaatgcatgat
gctacacctgttgcatatgcttcactgccaacagaaactattaattacgtatctgctcat
gacaatgaaactctctttgacattatcagtttgaagacaccgatggaaatatctgttgat
gaaaggtgtcgaatcaatcatttggcgtcaagtatgattgccctctctcagggtattcca
ttcttccatgctggggatgagattctacgctcgaaatcacttgatcgagattcttacaac
tccggtgactggttcaataggctggacttcagctacagttccaacaattggggtgttggg
cttcctccaaaagggaaaaacgaacacaactggccactgatcaaaccgaggctacaagat
ccatctttcaagcctaagagcagtcacatagttgccaccctccacaatttcttagatttg
ttacgcatcagatactcttcacctctctttcgtttagatacagcaagggctatacaggag
cgagtgcgatttcataacacaggcccctcatcaatccctggtgccattgtcatgagcatt
gaagatggtcacagaggcatcccaagtgtatctcagatcgatccaatctactcactcatt
gtggtaatcttcaatgcacgcccgtctgagttctcatatcccagtcccgctctaaaagac
aggaagctcgaattacacccggttcaggtgatgtcagccgatgaaatagtcaagaaatca
gtttacgactcgttttctgggggcttcactgtaccggcaagaacaacgacggtgtttgtt
gaatcgcggaatggttga

  All links  
Gene (26)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (36)   

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