KEGG   Arabidopsis thaliana (thale cress): AT5G07340
Entry
AT5G07340         CDS       T00041                                 
Name
(RefSeq) Calreticulin family protein
  KO
K08054  calnexin
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04141  Protein processing in endoplasmic reticulum
ath04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT5G07340
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    AT5G07340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ath03110]
    AT5G07340
   04131 Membrane trafficking [BR:ath04131]
    AT5G07340
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ath04091]
    AT5G07340
Chaperones and folding catalysts [BR:ath03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   AT5G07340
Membrane trafficking [BR:ath04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    AT5G07340
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    AT5G07340
Lectins [BR:ath04091]
 L-type lectins
  AT5G07340
SSDB
Motif
Pfam: Calreticulin OAD_gamma
Other DBs
NCBI-GeneID: 830625
NCBI-ProteinID: NP_196351
TAIR: AT5G07340
UniProt: Q38798 A0A654FZ34
Position
5:2317126..2319843
AA seq 532 aa
MRERIITFVSLLLVALLSFPSVSYCDDQTILYESFDEPFDGRWVVSEKAEYQGVWKHEKS
EGHDDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRP
QEAGWVPQGFDNDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDM
LSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERA
KIPDPNAVKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWE
APKVSNTKCEAAPGCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELE
RPNLEPIAAIGIEIWTMQDGILFDNILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEA
AGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFL
SLFFKLIFGGAKAKVEKKKPETAAETSTSEAKTEEKAEAVAAPRKRQTRRES
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgagagaacggattattacattcgtttcgctgcttcttgtagctttgctttcgtttccc
agtgttagctactgtgacgaccaaacgatcctgtatgaatcgtttgacgagccttttgat
ggtcgctgggtcgtttcagagaaagctgaataccaaggtgtgtggaagcacgagaagagt
gaagggcatgatgattatggacttctagtgagtgagaaagctaagaagtacggaatagtt
aaagagcttgatgttgatgagcctctaaaccttaacgaaggaactgttgttcttcaatac
gaggctcgtttccaagaagggcttgagtgtggtggtgcttacttaaagtatcttcgtcct
caagaagctggatgggttcctcaagggtttgataatgattctccttactctatcatgttt
ggacctgataagtgtggtgctaccaacaaggttcatttcatcttgaagcataagaatccc
aagagtggcgagtttgttgagcaccatctcaagttccctccttctgttccgtttgacatg
ctttctcatgtctacactgcggtcttgaaatctgataatgaggtgaggattttggtcgat
ggtgaggagaagaagaagggtaatttactgtctgctgaagactttgagcctccgttgatt
ccttccaagaccatccctgatccagaggacaagaagccagaagactgggatgagagagcc
aagattcctgatcctaatgctgtgaagcctgatgactgggatgaggatgcacccatggag
attgaagatgaggaagctgagaaacccgaaggatggttggatgatgagcctgtagaggtt
gaagaccccgaggcaagcaagccagaagattgggatgacgaggaagatggtgagtgggag
gctcctaaggtttccaacaccaagtgtgaggcagcacccggatgtggcgaatggaagaga
ccgatgaagaggaaccctgcttacaagggcaaatggagctcacctctcatagataaccca
gcttacaagggaatctggaaaccaagagacattccaaatcctgattattttgagcttgag
aggccgaatttggagcccattgctgccattggtattgagatatggacaatgcaagacggt
atcttatttgacaacatcttgatatctaaagacgagaaggttgctgaaacttacagacaa
agcacttggaagcccaagtttgatgtggagaaagagaaacaaaaggcagaggatgaagct
gctggtgaggcagatggtctcaagagttaccagaagaaggtgttcgacctcttgtacaag
gttgcagacatttctttccttagtgcgtacaagtcaaagattatggaacttattgagaaa
gctgaaacacagccaaacttaaccatcggtgtgctcatttccatcgtgatcgtcttcctc
tctctcttcttcaagctcatatttggtggtgcaaaggctaaggtagaaaagaagaaaccg
gaaacagctgcagagacctcgacaagcgaggcaaagacagaggagaaagcagaagcggtg
gctgcaccacgaaagaggcagacgaggcgtgagagttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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