KEGG   Arabidopsis thaliana (thale cress): AT5G09260
Entry
AT5G09260         CDS       T00041                                 
Symbol
VPS20.2
Name
(RefSeq) vacuolar protein sorting-associated protein 20.2
  KO
K12195  charged multivesicular body protein 6
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03250  Viral life cycle - HIV-1
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AT5G09260 (VPS20.2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G09260 (VPS20.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G09260 (VPS20.2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT5G09260 (VPS20.2)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    AT5G09260 (VPS20.2)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT5G09260 (VPS20.2)
  Exosomal proteins of other body fluids (saliva and urine)
   AT5G09260 (VPS20.2)
SSDB
Motif
Pfam: Snf7 TINF2_N HAUS5 IL34
Other DBs
NCBI-GeneID: 830785
NCBI-ProteinID: NP_196488
TAIR: AT5G09260
UniProt: Q9FY89 A0A5S9Y2N0
Position
5:2876698..2878753
AA seq 216 aa
MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL
ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD
VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP
EEPEKMDLPDVPTKAPVASNETTSTKRKVLEEPLEA
NT seq 651 nt   +upstreamnt  +downstreamnt
atggggaatttattcgtgaagaaaccgaagatcacggaggttgatcgagcgattctctct
ctcaaaacccaaaggcgcaagcttggtcaatatcagcaacagcttgagaaagtaattgaa
gcagaaaagcaagctgcaagagacttaatccgtgagaagcgaaaggacagggctttgtta
gcattgaagaaaaaacggacacaagaagagttgttgaagcaagtagatcagtggctcatc
aatgtcgaacaacaattggcagatatcgaacttacaagcaagcaaaaagcagtctttgag
agcttaaagcaaggtaacaatgcaattaaggcgattcagagcgaggtcaaccttgatgat
gttcaaaaactgatggatgacactgccgaggccaaggcttatcaggatgaactgagtgcc
atattaggtgagaaactatcagcggaagatgaagaagagatcttagcagaattcgacaac
ctagaaagtctgctgattgttgaagatatgcctgaagtgcctacgacagagctcatgcct
gaagaacccgagaaaatggatctccctgatgtgccaacaaaagcaccagtcgcttccaat
gaaaccacttcaacaaagagaaaagttcttgaagaacctttggaagcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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