KEGG   Arabidopsis thaliana (thale cress): AT5G09660
Entry
AT5G09660         CDS       T00041                                 
Symbol
PMDH2
Name
(RefSeq) peroxisomal NAD-malate dehydrogenase 2
  KO
K00026  malate dehydrogenase [EC:1.1.1.37]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00020  Citrate cycle (TCA cycle)
ath00270  Cysteine and methionine metabolism
ath00620  Pyruvate metabolism
ath00630  Glyoxylate and dicarboxylate metabolism
ath00710  Carbon fixation by Calvin cycle
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
ath01200  Carbon metabolism
Module
ath_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ath_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ath_M00012  Glyoxylate cycle
ath_M00168  CAM (Crassulacean acid metabolism), dark
ath_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    AT5G09660 (PMDH2)
   00620 Pyruvate metabolism
    AT5G09660 (PMDH2)
   00630 Glyoxylate and dicarboxylate metabolism
    AT5G09660 (PMDH2)
  09102 Energy metabolism
   00710 Carbon fixation by Calvin cycle
    AT5G09660 (PMDH2)
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    AT5G09660 (PMDH2)
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.37  malate dehydrogenase
     AT5G09660 (PMDH2)
SSDB
Motif
Pfam: Ldh_1_N Ldh_1_C 3Beta_HSD Semialdhyde_dh DapB_N
Other DBs
NCBI-GeneID: 830825
NCBI-ProteinID: NP_196528
TAIR: AT5G09660
UniProt: Q9ZP05 A0A178UMW0
Position
5:complement(2993411..2995784)
AA seq 354 aa
MEFRGDANQRIARISAHLTPQMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSL
LMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGI
PRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD
PKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQE
IEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQV
TELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggagtttcgtggagatgccaaccagaggattgctaggatttcagctcatctcactcct
cagatggaggccaagaactctgtaatcggacgggaaaactgcagagctaaaggtggtaat
ccaggattcaaagtagcaattcttggagctgcaggtggaattggacaatctttatctttg
ctgatgaagatgaaccctcttgtctctttacttcatctctacgatgttgtcaatgctcct
ggcgtcactgctgacgtcagtcatatggacactggagctgttgtccgcgggttcttggga
gcgaagcagcttgaggacgcgctaacgggtatggatcttgtgatcataccagccggtata
ccgaggaaaccagggatgacccgcgatgatctgtttaaaatcaatgctgggattgttaaa
acactatgtgaaggtgtagcaaaatgttgtcctaatgctattgtcaacttgatcagcaac
cctgtgaactctactgtccccattgccgctgaggttttcaagaaagctggaacttatgat
cctaagaagctccttggagttactacactcgatgttgctcgtgccaacacatttgtggca
gaagttcttggccttgatccaagagaagtcgatgtgccagtagttgggggacacgccgga
gtcacaatcttgccactactgtcacaggttaaacctcctagcagcttcacacctcaagaa
attgagtacctgacaaaccggattcaaaatggtggaactgaagttgtggaggcaaaagct
ggagctggttctgcaacactttcaatggcatatgctgcagccaagtttgcagatgcttgc
cttcgcgggttaagaggagatgcgaatgtcgtagaatgctcttttgttgcttcacaggtg
acagaattagctttctttgcaacaaaagtgcgccttggccgtacaggagcagaggaagtg
tatcagcttggacccttaaacgaatacgaaaggattggtctggagaaagcaaaagatgaa
ttagccggaagtattcagaaaggtgttgaattcatcagaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (8)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (3)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (58)   

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