KEGG   Arabidopsis thaliana (thale cress): AT5G11880
Entry
AT5G11880         CDS       T00041                                 
Name
(RefSeq) Pyridoxal-dependent decarboxylase family protein
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00300  Lysine biosynthesis
ath00470  D-Amino acid metabolism
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
ath01230  Biosynthesis of amino acids
Module
ath_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AT5G11880
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AT5G11880
Enzymes [BR:ath01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AT5G11880
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-GeneID: 831061
NCBI-ProteinID: NP_568252
TAIR: AT5G11880
UniProt: Q94A94 A0A654G0X9
Structure
Position
5:complement(3827526..3830228)
AA seq 489 aa
MAAVTQFLSQPSSIRGTLNQYQLNQTSLSRIPFLSLKSTLKPLKRLSVKAAVSQNSTKTL
TKESASSFDHCFKKSSDGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEG
VRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLED
LVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKF
GIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFE
VSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNH
VTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEAEVTKFDVVGPVCESAD
FLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAETFD
DHLRFFEGL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcggcagttactcaatttctctcccaaccttcatcaatccgcggaaccctaaatcag
taccaattgaatcagacttcactctcaagaatcccatttttgtctctcaagtcaacattg
aagccacttaaacgcctctccgtcaaagccgccgtttcccaaaactccaccaaaaccctc
acgaaagaatctgcttcctctttcgaccactgtttcaagaaatcatcagatgggtttctc
tattgcgaaggaaccaaggttcaagatatcatggaaacagtcgagaaacgacccttttac
ttatatagcaaacctcagatcacgagaaaccttgaggcttataaagaggctttggaagga
gtgagatctgttattggttacgctattaaagctaataacaatctcaagattttggagcat
ttgaggagtttgggctgtggtgctgtgttggttagtggaaatgagctcaggcttgctctt
cttgctggtttcgatcccacaaagtgtattttcaatggaaatggaaagtctttggaagat
ttagttctagctgctcaagaaggtgttttcgtaaatgttgatagtgagtttgacttgaat
aacattgtggaagcttcaagaatttctggtaagcaggtcaatgtgttgttgcgtatcaat
cctgatgttgatcctcaggtgcatccatatgtagctactgggaacaagaactcgaagttt
ggtattaggaacgagaagcttcaatggtttctggatgaagtgaaggcacatcccaaagag
ctgaagcttgttggagctcattgtcatcttggttctaccattacaaaggtggatatattc
agagatgctgcggttctcatgattgaatacattgatgaaatccggcgtcaaggctttgag
gttagctacttgaacattggtggtggtttagggatagattattatcatgccggcgctgtc
cttcctacacccatggatcttatcaacaccgtaagagagctggttctttcacgagacctg
aatctaataatcgagccagggagatcactgattgcaaacacatgttgtttcgtcaaccat
gtaactggtgtgaagacgaatggaactaaaaacttcatagtgattgatggaagtatggct
gagcttatccgtcccagtctttatgatgcctatcagcatattgagttggtctctcctaca
ccgcctgaagcagaggttaccaaattcgatgtagtgggtcctgtttgtgaatctgctgat
ttcttgggcaaagacagagagcttcccactcctccacagggagctggtctggtggttcat
gacgctggtgcatactgtatgagtatggcttccacttacaatctcaagatgcgtcccccg
gaatactgggttgaagaagatgggtcgatcactaagatcaggcatgctgagacattcgat
gaccatttacgtttctttgaaggactatga

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