KEGG   Arabidopsis thaliana (thale cress): AT5G22330
Entry
AT5G22330         CDS       T00041                                 
Symbol
RIN1
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
  KO
K04499  RuvB-like protein 1 [EC:5.6.2.4]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AT5G22330 (RIN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT5G22330 (RIN1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ath03037]
    AT5G22330 (RIN1)
Enzymes [BR:ath01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT5G22330 (RIN1)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     AT5G22330 (RIN1)
  Chromatin remodeling factors
   SRCAP complex
    AT5G22330 (RIN1)
   INO80 complex
    AT5G22330 (RIN1)
   INO80 complex (yeast)
    AT5G22330 (RIN1)
   SWR1 complex
    AT5G22330 (RIN1)
   ASTRA complex
    AT5G22330 (RIN1)
Cilium and associated proteins [BR:ath03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   AT5G22330 (RIN1)
SSDB
Motif
Pfam: TIP49 TIP49_C AAA RuvB_N AAA_22 AAA_5 AAA_16 AAA_19 bpMoxR Mg_chelatase AAA_25 AAA_18 DnaB_C GvpD_P-loop TsaE AAA_7 ResIII AAA_28 nSTAND3 IstB_IS21 Zeta_toxin AAA_11 Rad17
Other DBs
NCBI-GeneID: 832293
NCBI-ProteinID: NP_197625
TAIR: AT5G22330
UniProt: Q9FMR9 A0A178UK47
Position
5:complement(7390796..7394280)
AA seq 458 aa
MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIK
QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL
VIIRTQIYDPSEMIQIIAIRAQVEELTVDEECLVLLGEIGQRTSLRHAVQLLSPASIVAK
MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggagaaagtaaagattgaagaaattcagtccaccgctaagaaacaacggattgctact
cacacccatatcaaaggccttggcctcgagccaactggtatccctataaaattggcagct
ggatttgttggtcaacttgaggctagagaggcagctggtcttgtagttgacatgattaag
cagaagaaaatggcgggcaaggctcttttgcttgctggacctcctggaactgggaaaaca
gctttggctcttggaatctctcaagagctgggaagcaaggttccattctgtccaatggtt
ggatctgaggtttactcatcagaggttaagaaaacagaggttctcatggagaattttaga
cgtgccattggtctacgtatcaaggaaaccaaagaagtctatgaaggggaggtcaccgag
ctgtcaccagaagaaactgaaagcctcactggaggttatggtaaaagcatcagccatgtt
gtaattacactcaagacagtcaaaggaaccaaacatctgaaattggatcccactatctat
gatgccttgattaaggaaaaggtagctgtaggagatgtaatctatatcgaagcaaacagt
ggagctgtcaaacgggtaggtagaagtgatgcttttgccactgaatttgatctggaagca
gaagaatatgttccacttcccaaaggagaggtccacaaaaagaaagagatagtgcaggat
gtcacactccaagatctggatgcagcaaatgctcgacctcaaggtggccaggatatactt
tctttgatgggccaaatgatgaaaccgcggaagactgagatcactgataagcttcggcaa
gaaattaacaaggttgtgaaccgatatatagatgaaggtgtggcagagcttgttccagga
gttctatttattgatgaggttcatatgcttgatatggagtgcttctcatacttgaaccgt
gctcttgagagctcattatctccgatagtgatatttgcaacaaatagaggtgtttgcaac
gtaagagggactgatatgcccagcccccatggagtccctattgatctattagatcgattg
gttatcatccggactcaaatctatgatccctctgaaatgatccagattatagccattcgt
gcgcaagttgaagaattaaccgtggatgaagaatgcttggttctacttggggagattggg
caaagaacttcactaaggcacgctgtgcagcttctgtctcctgccagcattgtagcgaaa
atgaatggccgtgacaatatttgcaaggctgatatagaggaagtaacatcactctacttg
gatgctaaatcttcagcaaagcttttgcatgagcaacaagaaaaatacatctcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (46)   

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