KEGG   Arabidopsis thaliana (thale cress): AT5G22800
Entry
AT5G22800         CDS       T00041                                 
Symbol
EMB1030
Name
(RefSeq) Alanyl-tRNA synthetase, class IIc
  KO
K01872  alanyl-tRNA synthetase [EC:6.1.1.7]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AT5G22800 (EMB1030)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ath01007]
    AT5G22800 (EMB1030)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT5G22800 (EMB1030)
Enzymes [BR:ath01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.7  alanine---tRNA ligase
     AT5G22800 (EMB1030)
Amino acid related enzymes [BR:ath01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   AT5G22800 (EMB1030)
Transfer RNA biogenesis [BR:ath03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    AT5G22800 (EMB1030)
 Prokaryotic type
    AT5G22800 (EMB1030)
SSDB
Motif
Pfam: tRNA-synt_2c DHHA1 tRNA_SAD CDH1_2_SANT_HL1 DUF3216
Other DBs
NCBI-GeneID: 832343
NCBI-ProteinID: NP_680210
TAIR: AT5G22800
UniProt: Q9FFC7 A0A178U9H3
Position
5:complement(7615747..7620278)
AA seq 978 aa
MNFSRVNLFDFPLRPILLSHPSSIFVSTRFVTRTSAGVSPSILLPRSTQSPQIIAKSSSV
SVQPVSEDAKEDYQSKDVSGDSIRRRFLEFFASRGHKVLPSSSLVPEDPTVLLTIAGMLQ
FKPIFLGKVPREVPCATTAQRCIRTNDLENVGKTARHHTFFEMLGNFSFGDYFKKEAIKW
AWELSTIEFGLPANRVWVSIYEDDDEAFEIWKNEVGVSVERIKRMGEADNFWTSGPTGPC
GPCSELYYDFYPERGYDEDVDLGDDTRFIEFYNLVFMQYNKTEDGLLEPLKQKNIDTGLG
LERIAQILQKVPNNYETDLIYPIIAKISELANISYDSANDKAKTSLKVIADHMRAVVYLI
SDGVSPSNIGRGYVVRRLIRRAVRKGKSLGINGDMNGNLKGAFLPAVAEKVIELSTYIDS
DVKLKASRIIEEIRQEELHFKKTLERGEKLLDQKLNDALSIADKTKDTPYLDGKDAFLLY
DTFGFPVEITAEVAEERGVSIDMNGFEVEMENQRRQSQAAHNVVKLTVEDDADMTKNIAD
TEFLGYDSLSARAVVKSLLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFLYVS
SDGNQEKAVVEVSDVQKSLKIFVHKGTVKSGALEVGKEVEAAVDADLRQRAKVHHTATHL
LQSALKKVVGQETSQAGSLVAFDRLRFDFNFNRSLHDNELEEIECLINRWIGDATRLETK
VLPLADAKRAGAIAMFGEKYDENEVRVVEVPGVSMELCGGTHVGNTAEIRAFKIISEQGI
ASGIRRIEAVAGEAFIEYINSRDSQMTRLCSTLKVKAEDVTNRVENLLEELRAARKEASD
LRSKAAVYKASVISNKAFTVGTSQTIRVLVESMDDTDADSLKSAAEHLISTLEDPVAVVL
GSSPEKDKVSLVAAFSPGVVSLGVQAGKFIGPIAKLCGGGGGGKPNFAQAGGRKPENLPS
ALEKAREDLVATLSEKLG
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgaatttctccagagtaaacctcttcgattttcctcttagaccaattttgctttcgcat
ccttcttctattttcgtttctacacgttttgttaccagaacctctgcaggtgtttctcct
tctatcttacttcccagatcaactcagtctcctcagattattgctaagagctcatcagta
tcagtacagccagtgtctgaggatgctaaggaggattatcagtccaaagatgttagtgga
gattcaatacggcggcgttttcttgaattctttgcttctcgtggtcataaggtgcttcca
agttcgtctcttgtaccagaagatcctaccgtcttgctaacaattgcaggaatgcttcag
tttaagcctattttccttggaaaggtacctagagaggttccttgtgcaaccactgcgcaa
aggtgtatacgtacgaatgatttggagaatgttgggaaaacggctaggcaccatactttc
tttgagatgcttgggaactttagctttggtgattacttcaagaaagaagcgataaaatgg
gcatgggagctttcaactattgagtttgggctaccagctaatagagtttgggttagtata
tatgaagacgatgatgaagcttttgaaatctggaagaatgaagttggtgtttctgttgag
cggataaagagaatgggtgaagctgacaacttttggactagtggaccaactggtccttgt
ggtccatgctctgagttgtactatgacttctatcctgagagaggttatgatgaagatgtt
gatcttggggatgataccagatttattgagttctataatttggttttcatgcagtataac
aagacggaagatggattgcttgagcccttgaaacagaagaatatagatactggtcttggt
ttggaacgtatagctcaaatccttcagaaggttccaaacaactacgagacagatttgata
tatccaatcattgcaaagatctcagagttggcgaatatctcatatgactctgcaaatgac
aaggcaaagacaagtttaaaagtgattgcagatcacatgcgggcagttgtctatctcata
tcagatggtgtttctccttcaaatattggcagaggttatgtggttaggaggctaataaga
agagcagttcggaaggggaagtctctcggaataaatggggatatgaatggtaatctaaag
ggagcgtttttgccagcggttgctgaaaaggtgatagagttgagcacttatattgattca
gatgtaaaactaaaggcctcacgcatcattgaggagattaggcaagaagaacttcacttt
aagaaaactctggaaagaggagaaaagttacttgaccaaaagcttaacgatgcattgtca
attgctgataaaactaaggatacgccttatctggatggaaaagatgcgtttcttctttat
gacacatttggctttcctgtggagataactgcagaagttgctgaagaacgtggagtcagt
atagatatgaatggttttgaagtggaaatggagaatcaaagacgtcaatctcaagctgct
cacaatgttgtaaaactgacagttgaagacgatgctgacatgacgaaaaatattgcagac
actgagttccttggatatgacagtctctctgctcgtgctgttgtgaaaagtcttttggtg
aatgggaagcctgtgataagggtttctgaaggcagtgaagtagaggttctgctggacaga
actccgttctatgctgaatcaggaggtcaaattgcagatcatggttttctttatgttagc
agtgatgggaaccaagagaaagctgttgttgaggtaagtgatgtgcagaagtctcttaaa
atttttgttcacaagggcactgtaaaaagtggagctctagaagttggcaaggaggtggaa
gcagcagtagatgcagacttgaggcaacgagcgaaggttcaccataccgccactcatttg
ctccaatcggcacttaaaaaagtagtaggacaagaaacatcacaggctggttcattagta
gcttttgaccgcctcagattcgatttcaattttaatcggtccctgcatgataatgagctt
gaggaaatcgaatgcctgatcaataggtggattggggatgctacacgtcttgaaacaaaa
gtccttcctcttgctgatgcaaaacgtgctggagccatcgcaatgtttggggaaaaatat
gatgaaaacgaggttcgtgtagtagaagttcctggtgtctccatggaactttgtggtggc
actcatgttggcaatactgcagaaatacgagccttcaagattatctcagaacagggcatt
gcatctggaatccggcgtatagaagcggttgcaggtgaagcattcattgaatacataaac
tcacgggattctcaaatgacacgtctatgctcgactctcaaggtgaaagcagaggatgtt
acaaacagagtggagaatcttctagaggaactacgtgctgctagaaaagaagcctccgac
ttgcgttcaaaagcagctgtctataaagcatctgtcatatcgaacaaagcatttactgta
ggaacttcacagactataagagtgctcgttgagtcgatggatgacaccgatgctgactca
ttaaagagtgcagctgagcatttgataagcacattggaagatccagtcgctgtggtacta
ggatcatctccagaaaaagacaaggttagtttagttgctgcatttagtcctggagtagtc
tccctaggtgttcaagcagggaaattcattggccccatagctaagctgtgtggcggagga
ggtggtggaaagcccaattttgctcaggcaggcggcagaaagcctgaaaatctcccaagt
gccttagagaaagctcgggaagatctcgtggcaactctatccgaaaagctagggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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